RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 SARS2Q9NP81 518 aaKnown RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 PHPT1Q9NRX4 125 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 FGF21Q9NSA1 209 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 GOLGA6AQ9NYA3 693 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 SH3BGRL2Q9UJC5 107 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 HPCAL4Q9UM19 191 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 RPH3AQ9Y2J0 694 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ATP8A1Q9Y2Q0 1164 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.24□□□□□ -1.57
PTPN4-210ENST00000485247 NPFFR2Q9Y5X5 522 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 ACANP16112 2415 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 FER1L5A0AVI2 2057 aa5.24□□□□□ -1.57
PTPN4-210ENST00000485247 MASP2O00187 686 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 POLR2DO15514 142 aaKnown RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 BUB1O43683 1085 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 KIF1CO43896 1103 aaKnown RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 KLRC4O43908 158 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 STX10O60499 249 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 HSF2BPO75031 334 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 C9P02748 559 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 AMD1P17707 334 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 GM2AP17900 193 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 TBXAS1P24557 533 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 PBX1P40424 430 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CXCR3P49682 368 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 IST1P53990 364 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 ENPEPQ07075 957 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CDC16Q13042 620 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 TUBB3Q13509 450 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 KCNAB1Q14722 419 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 MYBPC3Q14896 1274 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 SLC39A14Q15043 492 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CDSNQ15517 529 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 DCAF17Q5H9S7 520 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 BRMS1LQ5PSV4 323 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 OTUD1Q5VV17 481 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 IZUMO3Q5VZ72 239 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 TMEM198Q66K66 360 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 IYDQ6PHW0 289 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 XKRXQ6PP77 449 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 FAM92BQ6ZTR7 304 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 MARK2Q7KZI7 788 aaKnown RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 MILR1Q7Z6M3 343 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 PHLDB2Q86SQ0 1253 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 SLC9B2Q86UD5 537 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 STK32CQ86UX6 486 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 ZNF354CQ86Y25 554 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CAMK1DQ8IU85 385 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CBARPQ8N350 705 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 ENDOVQ8N8Q3 282 aaKnown RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 HCAR2Q8TDS4 363 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 NRGNQ92686 78 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 KAT5Q92993 513 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 SH3KBP1Q96B97 665 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 NUS1Q96E22 293 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 C1orf74Q96LT6 269 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 OR2M4Q96R27 311 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 MLPHQ9BV36 600 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 TEX101Q9BY14 249 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 ZYG11BQ9C0D3 744 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CHST8Q9H2A9 424 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CDIP1Q9H305 208 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 PDE7BQ9NP56 450 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 DLL4Q9NR61 685 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 OLAHQ9NV23 265 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 EXOC1Q9NV70 894 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CNOT8Q9UFF9 292 aaKnown RBP5.23□□□□□ -1.57
PTPN4-210ENST00000485247 ZNHIT2Q9UHR6 403 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 DNAI1Q9UI46 699 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 RARRES3Q9UL19 164 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 SMC3Q9UQE7 1217 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 TRAF3IP3Q9Y228 551 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 SLC17A4Q9Y2C5 497 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 TMEM98Q9Y2Y6 226 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 MFHAS1Q9Y4C4 1052 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 DUSP10Q9Y6W6 482 aa5.23□□□□□ -1.57
PTPN4-210ENST00000485247 CSPG4Q6UVK1 2322 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CXorf51AA0A1B0GTR3 108 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 TSPAN11A1L157 253 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CFAP69A5D8W1 941 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 TOX3O15405 576 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-210ENST00000485247 KDELR3O43731 214 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 DLX3O60479 287 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 SNX2O60749 519 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 IPO13O94829 963 aaKnown RBP5.22□□□□□ -1.57
PTPN4-210ENST00000485247 IVLP07476 585 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 FOLR1P15328 257 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 RPL13P26373 211 aaKnown RBP5.22□□□□□ -1.57
PTPN4-210ENST00000485247 OTX2P32243 289 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 THBS2P35442 1172 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 SULT1E1P49888 294 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 CSNK1G2P78368 415 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 OTUD4Q01804 1114 aaKnown RBP5.22□□□□□ -1.57
PTPN4-210ENST00000485247 DEUP1Q05D60 604 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 MAP4K2Q12851 820 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 GPS2Q13227 327 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 PDCLQ13371 301 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 LSAMPQ13449 338 aa5.22□□□□□ -1.57
PTPN4-210ENST00000485247 NFIL3Q16649 462 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms