RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 PSTKQ8IV42 348 aaKnown RBP8.32□□□□□ -1.08
DDX39B-221ENST00000484566 TTC30BQ8N4P2 665 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 ZADH2Q8N4Q0 377 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 CLEC1AQ8NC01 280 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 LPCAT1Q8NF37 534 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 OR8K5Q8NH50 307 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 CPT1BQ92523 772 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 DMRTB1Q96MA1 342 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 LRFN5Q96NI6 719 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 SMIM14Q96QK8 99 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 PCDHB18PQ96TA0 734 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 CD180Q99467 661 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 TIMM29Q9BSF4 260 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 NLNQ9BYT8 704 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 LACRTQ9GZZ8 138 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 SLC40A1Q9NP59 571 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 NT5MQ9NPB1 228 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 KCND1Q9NSA2 647 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 FAM207AQ9NSI2 230 aaPredicted RBP8.32□□□□□ -1.08
DDX39B-221ENST00000484566 SEMA5BQ9P283 1151 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 FOXD3Q9UJU5 478 aaPredicted RBP8.32□□□□□ -1.08
DDX39B-221ENST00000484566 CNOT6Q9ULM6 557 aaKnown RBP8.32□□□□□ -1.08
DDX39B-221ENST00000484566 PADI2Q9Y2J8 665 aa8.32□□□□□ -1.08
DDX39B-221ENST00000484566 RGSL1A5PLK6 1076 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 C9J4A7 227 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 KMOO15229 486 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 MAFKO60675 156 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 ZG16O60844 167 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 SLC25A14O95258 325 aaPredicted RBP8.31□□□□□ -1.08
DDX39B-221ENST00000484566 IGHEP01854 428 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 ZNF7P17097 686 aaPredicted RBP8.31□□□□□ -1.08
DDX39B-221ENST00000484566 RPL10P27635 214 aaKnown RBP8.31□□□□□ -1.08
DDX39B-221ENST00000484566 PTGER4P35408 488 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 HCAR3P49019 387 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 SPINT3P49223 89 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 DRG2P55039 364 aaKnown RBP8.31□□□□□ -1.08
DDX39B-221ENST00000484566 POLR2FP61218 127 aaKnown RBP8.31□□□□□ -1.08
DDX39B-221ENST00000484566 PPP1CAP62136 330 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 OGDHQ02218 1023 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 DPYSQ14117 519 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 GPR19Q15760 415 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 HSP90AA4PQ58FG1 418 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 ANKRD20A8PQ5CZ79 823 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 AGAP9Q5VTM2 703 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 ABRAXAS1Q6UWZ7 409 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 WASH2PQ6VEQ5 465 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 DSELQ8IZU8 1212 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 D2HGDHQ8N465 521 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 ZBTB2Q8N680 514 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 CLIP3Q96DZ5 547 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 FER1L6-AS2Q96M78 137 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 IP6K3Q96PC2 410 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 LYSMD1Q96S90 227 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 PEBP4Q96S96 227 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 MAP3K3Q99759 626 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 ZSCAN5AQ9BUG6 496 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 SPATA16Q9BXB7 569 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 TDRD1Q9BXT4 1180 aaKnown RBP8.31□□□□□ -1.08
DDX39B-221ENST00000484566 SLC7A5P2Q9GIP4 190 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 GANQ9H2C0 597 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 ARFGAP3Q9NP61 516 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 NLRC4Q9NPP4 1024 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 SOHLH2Q9NX45 425 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 CWC15Q9P013 229 aaKnown RBP8.31□□□□□ -1.08
DDX39B-221ENST00000484566 COPG2Q9UBF2 871 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 OSGIN2Q9Y236 505 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 CHKBQ9Y259 395 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 TTLL3Q9Y4R7 772 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 STAB1Q9NY15 2570 aa8.31□□□□□ -1.08
DDX39B-221ENST00000484566 A0A1B0GUH1 482 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 PEX12O00623 359 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 VEGFDO43915 354 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 ZBTB11O95625 1053 aaPredicted RBP8.3□□□□□ -1.08
DDX39B-221ENST00000484566 BRAFP15056 766 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 HNRNPH3P31942 346 aaKnown RBP8.3□□□□□ -1.08
DDX39B-221ENST00000484566 OTX2P32243 289 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 JAM2P57087 298 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 RPL26P61254 145 aaKnown RBP8.3□□□□□ -1.08
DDX39B-221ENST00000484566 MYBPC3Q14896 1274 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 NCF4Q15080 339 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 ZNF648Q5T619 568 aaPredicted RBP8.3□□□□□ -1.08
DDX39B-221ENST00000484566 FAM69BQ5VUD6 431 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 ALS2CLQ60I27 953 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 PDPK2PQ6A1A2 396 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 ARMC6Q6NXE6 501 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 PPP1R2P3Q6NXS1 205 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 FAM198BQ6UWH4 519 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 IGFL3Q6UXB1 125 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 CERS6Q6ZMG9 384 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 MRGPREQ86SM8 312 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 OOSP2Q86WS3 158 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 SYTL1Q8IYJ3 562 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 GALNT16Q8N428 558 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.3□□□□□ -1.08
DDX39B-221ENST00000484566 MLKLQ8NB16 471 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 ZNF501Q96CX3 271 aaPredicted RBP8.3□□□□□ -1.08
DDX39B-221ENST00000484566 LURAP1Q96LR2 239 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 WDR24Q96S15 920 aa8.3□□□□□ -1.08
DDX39B-221ENST00000484566 BARD1Q99728 777 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms