RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CDYLQ9Y232 598 aa10.55□□□□□ -0.72
SMARCC1-205ENST00000483847 NIPBLQ6KC79 2804 aaeCLIP10.55□□□□□ -0.72
SMARCC1-205ENST00000483847 NUP210LQ5VU65 1888 aa10.55□□□□□ -0.72
SMARCC1-205ENST00000483847 MYO7BQ6PIF6 2116 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 A0A1B0GUH1 482 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 A0A1W2PQJ5 194 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 CCDC78A2IDD5 438 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 LRRC53A6NM62 1247 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 E7EQ34 232 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 HCRTR1O43613 425 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 UMODP07911 640 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 MSL3P1P0C860 447 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 AGXTP21549 392 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 GJC1P36383 396 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 FOLR3P41439 243 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 TSFMP43897 325 aaKnown RBP10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 CDC16Q13042 620 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 ART3Q13508 389 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 PIGHQ14442 188 aaPredicted RBP10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 NOMO1Q15155 1222 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 CT47A1Q5JQC4 288 aaPredicted RBP10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 FNBP1LQ5T0N5 605 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 CCDC183Q5T5S1 534 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 CDHR3Q6ZTQ4 885 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 B4GALNT4Q76KP1 1039 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 APTXQ7Z2E3 356 aaKnown RBP10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 PQLC3Q8N755 202 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 DNAJB14Q8TBM8 379 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 PPP4R1Q8TF05 950 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 ITLN2Q8WWU7 325 aaPredicted RBP10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 HDAC11Q96DB2 347 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 IMP4Q96G21 291 aaKnown RBP10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 RMDN2Q96LZ7 410 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 SLX1AQ9BQ83 275 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 SYTL2Q9HCH5 934 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 SERTAD3Q9UJW9 196 aa10.54□□□□□ -0.72
SMARCC1-205ENST00000483847 CNTRLQ7Z7A1 2325 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 GSAPA4D1B5 854 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 BTN3A3O00478 584 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 KLHL41O60662 606 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 MT-CYBP00156 380 aaPredicted RBP10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 CTSBP07858 339 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 PRDX3P30048 256 aaKnown RBP10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 PTGER4P35408 488 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 SSR1P43307 286 aaKnown RBP10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 KCNK10P57789 538 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 IFI35P80217 286 aaPredicted RBP10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 PRKAA1Q13131 559 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 ZNF169Q14929 603 aaPredicted RBP10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 TESK1Q15569 626 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 ASIC2Q16515 512 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 GPRC6AQ5T6X5 926 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 IGFL2Q6UWQ7 119 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 FAM151BQ6UXP7 276 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 DET1Q7L5Y6 550 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 ZNF295-AS1Q8N0V1 137 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 LILRA3Q8N6C8 439 aaPredicted RBP10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 NIPA2Q8N8Q9 360 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 OR2Y1Q8NGV0 311 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 SPATA22Q8NHS9 363 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 BRSK1Q8TDC3 778 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 ZFPM2Q8WW38 1151 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 RELTQ969Z4 430 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 TADA1Q96BN2 335 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 CNDP1Q96KN2 507 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 AGAP3Q96P47 875 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 GBP5Q96PP8 586 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 PITPNM3Q9BZ71 974 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 TRIM8Q9BZR9 551 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 ISCUQ9H1K1 167 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 FAM60AQ9NP50 221 aa10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 KLF2Q9Y5W3 355 aaPredicted RBP10.53□□□□□ -0.72
SMARCC1-205ENST00000483847 H3BMH7 237 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 BTN3A1O00481 513 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 GAPDHSO14556 408 aaPredicted RBP10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 BUD23O43709 281 aaKnown RBP10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 DIAPH2O60879 1101 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 JRKO75564 520 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 NDST3O95803 873 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 IGHEP01854 428 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 POLBP06746 335 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 HBQ1P09105 142 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 MYBL1P10243 752 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 SKILP12757 684 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 KRTAP10-9P60411 292 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 PPIDQ08752 370 aaKnown RBP10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 CYP2A13Q16696 494 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 DEFB110Q30KQ9 67 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 NT5DC3Q86UY8 548 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 PARP9Q8IXQ6 854 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 NXPE1Q8N323 547 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 DDHD1Q8NEL9 900 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 PTERQ96BW5 349 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 TRIM11Q96F44 468 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 POM121Q96HA1 1249 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 ZCCHC2Q9C0B9 1178 aaKnown RBP10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 SPRTNQ9H040 489 aaPredicted RBP10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 NUP62CLQ9H1M0 184 aa10.52□□□□□ -0.73
SMARCC1-205ENST00000483847 DEF6Q9H4E7 631 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms