RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ELF3P78545 371 aaPredicted RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 GSTM4Q03013 218 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GTF2H2Q13888 395 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 RAET1GQ6H3X3 334 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GTF2H2CQ6P1K8 395 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 PNCKQ6P2M8 343 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 UBE2R2Q712K3 238 aaPredicted RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 EFL1Q7Z2Z2 1120 aaKnown RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 GOLGA7Q7Z5G4 137 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 TMPRSS6Q8IU80 811 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 TWIST2Q8WVJ9 160 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GLMNQ92990 594 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 ERLEC1Q96DZ1 483 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 CMTM5Q96DZ9 223 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 ZNF514Q96K75 400 aaPredicted RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 C3orf30Q96M34 536 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 RAB3IPQ96QF0 476 aaPredicted RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 ZCCHC2Q9C0B9 1178 aaKnown RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 MKRN2Q9H000 416 aaKnown RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 HEBP1Q9NRV9 189 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 KLC4Q9NSK0 619 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 MRGBPQ9NV56 204 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GULP1Q9UBP9 304 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 SERGEFQ9UGK8 458 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GPR34Q9UPC5 381 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 STK38LQ9Y2H1 464 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 FIS1Q9Y3D6 152 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 C17orf113A0A1B0GUU1 675 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 A0A1W2PP55 124 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 TMEM202A6NGA9 273 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 IGLON5A6NGN9 336 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 SHISA7A6NL88 538 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GUCA1CO95843 209 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 HSPA7P48741 367 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 ERVPABLB-1P60509 514 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 BOP1Q14137 746 aaKnown RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 STARD3Q14849 445 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 WSCD2Q2TBF2 565 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 TMEM198Q66K66 360 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 NXNQ6DKJ4 435 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GPRIN3Q6ZVF9 776 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 TRMT11Q7Z4G4 463 aaKnown RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 TCAIMQ8N3R3 496 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 TEX9Q8N6V9 391 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 C19orf60Q96EN9 201 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 LRCH3Q96II8 777 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 HIC2Q96JB3 615 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 KCNA7Q96RP8 456 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 CADM1Q9BY67 442 aaKnown RBP13.76□□□□□ -0.21
CLK3-204ENST00000483723 TRIM54Q9BYV2 358 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 ATXN10Q9UBB4 475 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 SCML1Q9UN30 329 aa13.76□□□□□ -0.21
CLK3-204ENST00000483723 K7EPI3 171 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 MGRN1O60291 552 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 PSIP1O75475 530 aaKnown RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 KLF8O95600 359 aaPredicted RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 COL9A1P20849 921 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 PIK3R1P27986 724 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 MNAT1P51948 309 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 AP1S2P56377 157 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 GRSF1Q12849 480 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLK3-204ENST00000483723 HERC3Q15034 1050 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 ZXDCQ2QGD7 858 aaPredicted RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 IER5LQ5T953 404 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 FAM219BQ5XKK7 198 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 XKR5Q6UX68 686 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 HOMEZQ8IX15 550 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 SLC22A15Q8IZD6 547 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 OR52B6Q8NGF0 335 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 LENG8Q96PV6 779 aaPredicted RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 CCT7Q99832 543 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 EGFL8Q99944 293 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 NTMT1Q9BV86 223 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 PHF7Q9BWX1 381 aaPredicted RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 C1QTNF2Q9BXJ5 285 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 UBE2ZQ9H832 354 aaPredicted RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 ZFR2Q9UPR6 939 aaKnown RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 COPG1Q9Y678 874 aaKnown RBP13.75□□□□□ -0.21
CLK3-204ENST00000483723 ATG2BQ96BY7 2078 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 TRPM6Q9BX84 2022 aa13.75□□□□□ -0.21
CLK3-204ENST00000483723 CDH23Q9H251 3354 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 LAMA3Q16787 3333 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 LIN7AO14910 233 aaPredicted RBP13.74□□□□□ -0.21
CLK3-204ENST00000483723 PIP5K1BO14986 540 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 GYG2O15488 501 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 PLRG1O43660 514 aaKnown RBP13.74□□□□□ -0.21
CLK3-204ENST00000483723 VPS4BO75351 444 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 OR4F21O95013 312 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 PCDH8O95206 1070 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 PRR35P0CG20 571 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 COX4I1P13073 169 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 HOXB2P14652 356 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 CYP2A7P20853 494 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 CPOXP36551 454 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 MAPK9P45984 424 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 CPA2P48052 419 aa13.74□□□□□ -0.21
CLK3-204ENST00000483723 HNMTP50135 292 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms