RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CCDC86Q9H6F5 360 aaKnown RBP16.2■□□□□ 0.18
HMGN1-214ENST00000482733 MVB12BQ9H7P6 319 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 POLR1BQ9H9Y6 1135 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 IL1RAPL1Q9NZN1 696 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PDP2Q9P2J9 529 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PCDHGA8Q9Y5G5 932 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 CFAP20Q9Y6A4 193 aaKnown RBP16.2■□□□□ 0.18
HMGN1-214ENST00000482733 AK5Q9Y6K8 562 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PTPRBP23467 1997 aa16.2■□□□□ 0.18
HMGN1-214ENST00000482733 PRAMEF33A0A0G2JMD5 474 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 IGHV5-10-1A0A0J9YXX1 117 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CTAGE15A4D2H0 777 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 HGSO14964 777 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-214ENST00000482733 EIF3HO15372 352 aaKnown RBP eCLIP16.19■□□□□ 0.18
HMGN1-214ENST00000482733 BANF1O75531 89 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 S1PR4O95977 384 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CTAGE8P0CG41 777 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 THRAP10827 490 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 HOXB3P14651 431 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-214ENST00000482733 ITGB6P18564 788 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 AOAHP28039 575 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 FMO4P31512 558 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CCR7P32248 378 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CSF2RBP32927 897 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 MLLT3P42568 568 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-214ENST00000482733 GABREP78334 506 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CFHR1Q03591 330 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 PDIA2Q13087 525 aaKnown RBP16.19■□□□□ 0.18
HMGN1-214ENST00000482733 FRG1Q14331 258 aaKnown RBP16.19■□□□□ 0.18
HMGN1-214ENST00000482733 PLCL1Q15111 1095 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 HSP90AA5PQ58FG0 334 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 STEAP4Q687X5 459 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 ZNF574Q6ZN55 896 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-214ENST00000482733 TMPRSS9Q7Z410 1059 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CTAGE6Q86UF2 777 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 IGDCC3Q8IVU1 814 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CTAGE4Q8IX94 777 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 MMGT1Q8N4V1 131 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 TFGQ92734 400 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-214ENST00000482733 BIRC8Q96P09 236 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 FERD3LQ96RJ6 166 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CMKLR1Q99788 373 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 PHACTR1Q9C0D0 580 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 SEMA6CQ9H3T2 930 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 KIR3DX1Q9H7L2 352 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 GRHL1Q9NZI5 618 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 CHMP2BQ9UQN3 213 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 COMMD10Q9Y6G5 202 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 RP1P56715 2156 aa16.19■□□□□ 0.18
HMGN1-214ENST00000482733 ZFC3H1O60293 1989 aaKnown RBP16.18■□□□□ 0.18
HMGN1-214ENST00000482733 IQCF5A8MTL0 148 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 GPC4O75487 556 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 PKMP14618 531 aaKnown RBP16.18■□□□□ 0.18
HMGN1-214ENST00000482733 SLC1A2P43004 574 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CAPZBP47756 277 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 HSPA14Q0VDF9 509 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CTBP1Q13363 440 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 BRD3Q15059 726 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 C3orf38Q5JPI3 329 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CTSL3PQ5NE16 218 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 PLEKHS1Q5SXH7 462 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 DUS1LQ6P1R4 473 aaKnown RBP16.18■□□□□ 0.18
HMGN1-214ENST00000482733 IGF2-ASQ6U949 168 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 UNC5AQ6ZN44 842 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 KIAA0408Q6ZU52 694 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 RAB11FIP2Q7L804 512 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 OTOAQ7RTW8 1153 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 DENND6AQ8IWF6 608 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CNTN4Q8IWV2 1026 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 SLC22A15Q8IZD6 547 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 KRT222Q8N1A0 295 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 FBXO39Q8N4B4 442 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CEP112Q8N8E3 955 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 KDF1Q8NAX2 398 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-214ENST00000482733 ACVR1CQ8NER5 493 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 GSDMBQ8TAX9 411 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 LKAAEAR1Q8TD35 194 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 ART4Q93070 314 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CERS2Q96G23 380 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CFAP36Q96G28 342 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CCDC74BQ96LY2 380 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CNTNAP3BQ96NU0 1288 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CNTNAP3Q9BZ76 1288 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 RAB33BQ9H082 229 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CCDC68Q9H2F9 335 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 IARS2Q9NSE4 1012 aaKnown RBP16.18■□□□□ 0.18
HMGN1-214ENST00000482733 EPHA6Q9UF33 1036 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 SLC24A2Q9UI40 661 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 FBXO5Q9UKT4 447 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 SATB2Q9UPW6 733 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 CRYL1Q9Y2S2 319 aa16.18■□□□□ 0.18
HMGN1-214ENST00000482733 MN1Q10571 1320 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-214ENST00000482733 KNTC1P50748 2209 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 BHMG1C9JSJ3 638 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 PLD2O14939 933 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 KDM1AO60341 852 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 DXOO77932 396 aaKnown RBP16.17■□□□□ 0.18
HMGN1-214ENST00000482733 SLCO2B1O94956 709 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 MPOP05164 745 aa16.17■□□□□ 0.18
HMGN1-214ENST00000482733 ERVK-10P10266 1014 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms