RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 MYF6P23409 242 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ACP1P24666 158 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 CDC25AP30304 524 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 CDC25CP30307 473 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 CSTF2P33240 577 aaKnown RBP eCLIP4.08□□□□□ -1.76
VPS41-212ENST00000482217 PCGF2P35227 344 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 SERPINB6P35237 376 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 CAPGP40121 348 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 MPLP40238 635 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ARSFP54793 590 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 EIF3BP55884 814 aaKnown RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 MAP3K7CLP57077 242 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 MZT1Q08AG7 82 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ASPHQ12797 758 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ABRQ12979 859 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ZNF177Q13360 481 aaPredicted RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 FHL3Q13643 280 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 RUNX2Q13950 521 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ST3GAL2Q16842 350 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 LY6KQ17RY6 165 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 KRT24Q2M2I5 525 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ZNF667Q5HYK9 610 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 EFHC1Q5JVL4 640 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 TEX35Q5T0J7 233 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 GRTP1Q5TC63 336 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 C18orf63Q68DL7 685 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 IGFL4Q6B9Z1 124 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 PMF1Q6P1K2 205 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 TMEM88Q6PEY1 159 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 MACC1Q6ZN28 852 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 SEPT14Q6ZU15 432 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 EFL1Q7Z2Z2 1120 aaKnown RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 ZNF551Q7Z340 670 aaPredicted RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 HAUS6Q7Z4H7 955 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ZNF410Q86VK4 478 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 SLC44A3Q8N4M1 653 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.08□□□□□ -1.76
VPS41-212ENST00000482217 RASGEF1AQ8N9B8 481 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 CLHC1Q8NHS4 586 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 RP9Q8TA86 221 aaKnown RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 SUN3Q8TAQ9 357 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 PARD3Q8TEW0 1356 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 POMGNT1Q8WZA1 660 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 GRAMD1AQ96CP6 724 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 KLHL29Q96CT2 875 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 R3HDM4Q96D70 268 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 RNFT2Q96EX2 444 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 SLC47A1Q96FL8 570 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 C16orf58Q96GQ5 468 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 PRR11Q96HE9 360 aaPredicted RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 TPD52L3Q96J77 140 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ZNF558Q96NG5 402 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ASCL2Q99929 193 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 MTG1Q9BT17 334 aaPredicted RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 LSG1Q9H089 658 aaKnown RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 NUAK2Q9H093 628 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 TSPYL1Q9H0U9 437 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 THAP2Q9H0W7 228 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 TUFT1Q9NNX1 390 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 OLAHQ9NV23 265 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 NUDT15Q9NV35 164 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 PRMT7Q9NVM4 692 aaPredicted RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 BARHL2Q9NY43 387 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 HAO2Q9NYQ3 351 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 NKX1-2Q9UD57 310 aaPredicted RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 LEF1Q9UJU2 399 aaPredicted RBP4.08□□□□□ -1.76
VPS41-212ENST00000482217 VPS4AQ9UN37 437 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ERVK-19Q9WJR5 959 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 SLC27A6Q9Y2P4 619 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 ZHX2Q9Y6X8 837 aa4.08□□□□□ -1.76
VPS41-212ENST00000482217 TEX13CA0A0J9YWL9 993 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 FAM230AA0A1W2PPH8 454 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 MEX3AA1L020 520 aaKnown RBP4.07□□□□□ -1.76
VPS41-212ENST00000482217 BTBD17A6NE02 478 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 EFCAB8A8MWE9 144 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 TEX22C9J3V5 150 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 H0Y8G0 127 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 M0QYT0 321 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 AGPSO00116 658 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 LGALS8O00214 317 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 HS3ST1O14792 307 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 XPO1O14980 1071 aaKnown RBP4.07□□□□□ -1.76
VPS41-212ENST00000482217 SMAD9O15198 467 aaKnown RBP4.07□□□□□ -1.76
VPS41-212ENST00000482217 SUV39H1O43463 412 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 PAGE4O60829 102 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 CLPXO76031 633 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 SLC16A8O95907 504 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 ERBB2P04626 1255 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 SERPING1P05155 500 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 FESP07332 822 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 FHP07954 510 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 SERPINF2P08697 491 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 NR2F6P10588 404 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 COX7A2P14406 83 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 CYP2F1P24903 491 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 ITGB8P26012 769 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 AXLP30530 894 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 HOXA6P31267 233 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 PPP1R2P41236 205 aa4.07□□□□□ -1.76
VPS41-212ENST00000482217 GRIA3P42263 894 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms