RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 ZNF556Q9HAH1 456 aa5.4□□□□□ -1.54
SF3B1-210ENST00000482158 DDX25Q9UHL0 483 aaKnown RBP5.4□□□□□ -1.54
SF3B1-210ENST00000482158 SYNGR3O43761 229 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 CTSVO60911 334 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 GGPS1O95749 300 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 ACP2P11117 423 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 CBLP22681 906 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 MATR3P43243 847 aaKnown RBP eCLIP5.39□□□□□ -1.55
SF3B1-210ENST00000482158 CSE1LP55060 971 aaKnown RBP5.39□□□□□ -1.55
SF3B1-210ENST00000482158 MLLT10P55197 1068 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 ERVFC1-1P60608 527 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 NDUFAF5Q5TEU4 345 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 KLC3Q6P597 504 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 FAM198BQ6UWH4 519 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 ZNF852Q6ZMS4 543 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 KCTD8Q6ZWB6 473 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 CRYBG2Q8N1P7 616 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 CIARTQ8N365 385 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-210ENST00000482158 L3MBTL4Q8NA19 623 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 POC1AQ8NBT0 407 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 EXD1Q8NHP7 514 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 SECISBP2LQ93073 1101 aaKnown RBP5.39□□□□□ -1.55
SF3B1-210ENST00000482158 VPS33AQ96AX1 596 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 C17orf77Q96MU5 243 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 LRRC1Q9BTT6 524 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 NOL11Q9H8H0 719 aaKnown RBP5.39□□□□□ -1.55
SF3B1-210ENST00000482158 FKRPQ9H9S5 495 aa5.39□□□□□ -1.55
SF3B1-210ENST00000482158 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.39□□□□□ -1.554e-12■□□□□ 10.1
SF3B1-210ENST00000482158 SOS1Q07889 1333 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-210ENST00000482158 EDDM13A0A1B0GTR0 161 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 ELOVL7A1L3X0 281 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 ZNF500O60304 480 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-210ENST00000482158 PDE9AO76083 593 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 IGHV4-39P01824 125 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 FYNP06241 537 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 DGKAP23743 735 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 EEF1DP29692 281 aaKnown RBP5.38□□□□□ -1.55
SF3B1-210ENST00000482158 IL15P40933 162 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-210ENST00000482158 PITX1P78337 314 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-210ENST00000482158 MBTD1Q05BQ5 628 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 RALGDSQ12967 914 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 PLA2G7Q13093 441 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 DUOXA1Q1HG43 343 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 SIRPB2Q5JXA9 342 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 PACS1Q6VY07 963 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 IQCHQ86VS3 1027 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 TICAM2Q86XR7 235 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 RDM1Q8NG50 284 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 OR5M8Q8NGP6 311 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 RMDN1Q96DB5 314 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 CFAP57Q96MR6 1250 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 FNDC11Q9BVV2 318 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 AP1M1Q9BXS5 423 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 OPA3Q9H6K4 179 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 RETREG1Q9H6L5 497 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 ZCCHC17Q9NP64 241 aaKnown RBP5.38□□□□□ -1.55
SF3B1-210ENST00000482158 ACKR4Q9NPB9 350 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 IL17BQ9UHF5 180 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 SPIN1Q9Y657 262 aaPredicted RBP5.38□□□□□ -1.55
SF3B1-210ENST00000482158 SCN5AQ14524 2016 aa5.38□□□□□ -1.55
SF3B1-210ENST00000482158 TRIM77I1YAP6 450 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 SYNCRIPO60506 623 aaKnown RBP5.37□□□□□ -1.55
SF3B1-210ENST00000482158 CELF2O95319 508 aaKnown RBP5.37□□□□□ -1.55
SF3B1-210ENST00000482158 APOA4P06727 396 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 OR2T7P0C7T2 308 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 TKTP29401 623 aaKnown RBP5.37□□□□□ -1.55
SF3B1-210ENST00000482158 PSMC4P43686 418 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 THOP1P52888 689 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 VWC2Q2TAL6 325 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 KRBOX4Q5JUW0 171 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 KRT80Q6KB66 452 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 KIAA1161Q6NSJ0 714 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 LINGO4Q6UY18 593 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 C9orf139Q6ZV77 190 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 CENPVQ7Z7K6 275 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-210ENST00000482158 LONP2Q86WA8 852 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 RFLNBQ8N5W9 214 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 PI4KAP1Q8N8J0 262 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 SPDL1Q96EA4 605 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 ZMAT2Q96NC0 199 aaKnown RBP5.37□□□□□ -1.55
SF3B1-210ENST00000482158 WNT5BQ9H1J7 359 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 PELI2Q9HAT8 420 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 ABCF3Q9NUQ8 709 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 TUBE1Q9UJT0 475 aa5.37□□□□□ -1.55
SF3B1-210ENST00000482158 ZHX1Q9UKY1 873 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-210ENST00000482158 A0A1W2PPI3 338 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 DENND3A2RUS2 1198 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 DIAPH2O60879 1101 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 ZNF41P51814 821 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-210ENST00000482158 ARL16Q0P5N6 197 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 GAGE5Q13069 117 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 GAGE6Q13070 117 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 KIR2DS3Q14952 304 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 CST9LP1Q5W188 147 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 WBP2NLQ6ICG8 309 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 TMPRSS11FQ6ZWK6 438 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 ANO5Q75V66 913 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 EXOC3L1Q86VI1 746 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 FAM114A1Q8IWE2 563 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 CPSF7Q8N684 471 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms