RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 GRAMD4Q6IC98 578 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 LAYNQ6UX15 382 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 CERS6Q6ZMG9 384 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 FRA10AC1Q70Z53 315 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 SATL1Q86VE3 508 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 CLYBLQ8N0X4 340 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 STK40Q8N2I9 435 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 GALNT4Q8N4A0 578 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 OSCP1Q8WVF1 389 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 FOXJ1Q92949 421 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 ATP6V1E2Q96A05 226 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 EME1Q96AY2 570 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 HGH1Q9BTY7 390 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 WRAP53Q9BUR4 548 aaKnown RBP14.2□□□□□ -0.14
CHD3-211ENST00000481999 LATS2Q9NRM7 1088 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 GNPTGQ9UJJ9 305 aa14.2□□□□□ -0.14
CHD3-211ENST00000481999 DOCK8Q8NF50 2099 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 TMEM202A6NGA9 273 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 OR2AG2A6NM03 316 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 FGF19O95750 216 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 DIO3P55073 304 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 HSPA14Q0VDF9 509 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 GAB4Q2WGN9 574 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 ANKS6Q68DC2 871 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 LETMD1Q6P1Q0 360 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 DUS3LQ96G46 650 aaKnown RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 ASB16Q96NS5 453 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 HEPHQ9BQS7 1158 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 MRPS26Q9BYN8 205 aaKnown RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 TRIM8Q9BZR9 551 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 PCDHAC1Q9H158 963 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 MTIF3Q9H2K0 278 aaKnown RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 NKX2-4Q9H2Z4 354 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 NOL11Q9H8H0 719 aaKnown RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 CD300AQ9UGN4 299 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 POLG2Q9UHN1 485 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 PRORSD1PA6NEY8 169 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 KPNA3O00505 521 aaPredicted RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 FFAR2O15552 330 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 PGM3O95394 542 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 FAM58BPP0C7Q3 252 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 TIMP2P16035 220 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 C6orf52Q5T4I8 152 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 GPRC6AQ5T6X5 926 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 KANK2Q63ZY3 851 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 KIAA0907Q7Z7F0 614 aaPredicted RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 METTL3Q86U44 580 aaKnown RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 OR2T11Q8NH01 316 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 SKA2Q8WVK7 121 aaPredicted RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 ROPN1LQ96C74 230 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 TUBGCP3Q96CW5 907 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 DGCR14Q96DF8 476 aaKnown RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 CEP44Q9C0F1 390 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 TMEM181Q9P2C4 612 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 GMPR2Q9P2T1 348 aaKnown RBP14.19□□□□□ -0.14
CHD3-211ENST00000481999 PCDHB1Q9Y5F3 818 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 DOCK9Q9BZ29 2069 aa14.19□□□□□ -0.14
CHD3-211ENST00000481999 SYCE1LA8MT33 242 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 BBIP1A8MTZ0 92 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 FADS2P1A8MWK0 482 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 ZNF197O14709 1029 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 STAMBPO95630 424 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 RB1P06400 928 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 FGF4P08620 206 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 ZNF26P17031 533 aaPredicted RBP14.18□□□□□ -0.14
CHD3-211ENST00000481999 HTR6P50406 440 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 ERVPABLB-1P60509 514 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 ERVK-21P61565 698 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 CDKL1Q00532 357 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 RALGDSQ12967 914 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 BOP1Q14137 746 aaKnown RBP14.18□□□□□ -0.14
CHD3-211ENST00000481999 AP1ARQ63HQ0 302 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 TANGO2Q6ICL3 276 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 C8orf82Q6P1X6 216 aaPredicted RBP14.18□□□□□ -0.14
CHD3-211ENST00000481999 ZBTB2Q8N680 514 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 LILRA3Q8N6C8 439 aaPredicted RBP14.18□□□□□ -0.14
CHD3-211ENST00000481999 PCYOX1LQ8NBM8 494 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 LRCH3Q96II8 777 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 ZNF641Q96N77 438 aaPredicted RBP14.18□□□□□ -0.14
CHD3-211ENST00000481999 COPS8Q99627 209 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 EFHD1Q9BUP0 239 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 C1orf50Q9BV19 199 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 PPIL1Q9Y3C6 166 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 TCRBV3S1A0A5B6 114 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 AGAP14A8MT82 685 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 HEPACAM2A8MVW5 462 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 TAPBPO15533 448 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 KLK8O60259 260 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 TFAP2AP05549 437 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 SLC7A1P30825 629 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 AKT1P31749 480 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 MYBPC1Q00872 1141 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 ARHGEF7Q14155 803 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 AAK1Q2M2I8 961 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 ZXDCQ2QGD7 858 aaPredicted RBP14.18□□□□□ -0.14
CHD3-211ENST00000481999 PARS2Q7L3T8 475 aaKnown RBP14.18□□□□□ -0.14
CHD3-211ENST00000481999 PHYKPLQ8IUZ5 450 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 FUNDC1Q8IVP5 155 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 TEX37Q96LM6 180 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 RIOK2Q9BVS4 552 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms