RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 TMEM151AQ8N4L1 468 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 FAM160A2Q8N612 972 aaPredicted RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 AVL9Q8NBF6 648 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 MCOLN3Q8TDD5 553 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 CCDC97Q96F63 343 aaPredicted RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 HIST1H2AHQ96KK5 128 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 ATOH8Q96SQ7 321 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 SLC30A3Q99726 388 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 HIST1H2AJQ99878 128 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 H2AFJQ9BTM1 129 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 TRMOQ9BU70 441 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 ERVMER34-1Q9H9K5 563 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 PARVBQ9HBI1 364 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 OXSMQ9NWU1 459 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 SIRPGQ9P1W8 387 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 GALPQ9UBC7 116 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 XPR1Q9UBH6 696 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 PCOLCE2Q9UKZ9 415 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 RNF112Q9ULX5 631 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 SUFUQ9UMX1 484 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 TMEM98Q9Y2Y6 226 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 TNPO3Q9Y5L0 923 aaKnown RBP9.96□□□□□ -0.82
USP39-215ENST00000481409 HEBP2Q9Y5Z4 205 aa9.96□□□□□ -0.82
USP39-215ENST00000481409 DOCK9Q9BZ29 2069 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 A0A1B0GTW7 788 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 PRR19A6NJB7 356 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 OR5K4A6NMS3 321 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 PRR33A8MZF0 331 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 TMEM114B3SHH9 223 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 G3V2L1 256 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 TLR4O00206 839 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 TNFRSF10AO00220 468 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 POLR3GO15318 223 aaPredicted RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 BCAT2O15382 392 aaPredicted RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 DFNA5O60443 496 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 PSIP1O75475 530 aaKnown RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 IPO13O94829 963 aaKnown RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 ANXA5P08758 320 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 NEFHP12036 1026 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ITGB6P18564 788 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 MAP4P27816 1152 aaKnown RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 NDUFS1P28331 727 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 HSD17B2P37059 387 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 HK2P52789 917 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 HK3P52790 923 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ALDH18A1P54886 795 aaKnown RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 CTBSQ01459 385 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ILF3Q12906 894 aaKnown RBP eCLIP9.95□□□□□ -0.82
USP39-215ENST00000481409 PCLAFQ15004 111 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 TGFBIQ15582 683 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 TMEM31Q5JXX7 168 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ZNF648Q5T619 568 aaPredicted RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 PEAR1Q5VY43 1037 aaPredicted RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 LYSMD4Q5XG99 296 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 SULT1C3Q6IMI6 304 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 DOK6Q6PKX4 331 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 PIWIL4Q7Z3Z4 852 aaKnown RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 PDZD3Q86UT5 571 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 TAX1BP1Q86VP1 789 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 GPSM1Q86YR5 675 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 CHCHD4Q8N4Q1 142 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 FRMD1Q8N878 549 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 PDPRQ8NCN5 879 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ZBTB44Q8NCP5 570 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 OR13H1Q8NG92 308 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 C1orf216Q8TAB5 229 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 CEP76Q8TAP6 659 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 MDM1Q8TC05 714 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 LRRC8CQ8TDW0 803 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ZFPM2Q8WW38 1151 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ATL1Q8WXF7 558 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 PTERQ96BW5 349 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ZBTB9Q96C00 473 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 L3HYPDHQ96EM0 354 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 PRRX2Q99811 253 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 C1QTNF3Q9BXJ4 246 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 GSDMCQ9BYG8 508 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 ALG9Q9H6U8 611 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 MANSC1Q9H8J5 431 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 CARS2Q9HA77 564 aaKnown RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 FGF22Q9HCT0 170 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 TM9SF3Q9HD45 589 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 PSD3Q9NYI0 1048 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 NCKIPSDQ9NZQ3 722 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 GULP1Q9UBP9 304 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 POLG2Q9UHN1 485 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 EIF2B4Q9UI10 523 aaKnown RBP9.95□□□□□ -0.82
USP39-215ENST00000481409 STK38LQ9Y2H1 464 aa9.95□□□□□ -0.82
USP39-215ENST00000481409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 ZNF839A8K0R7 811 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 H0Y8X5 98 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 TK2O00142 265 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 YKT6O15498 198 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 NPHS1O60500 1241 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 SNX2O60749 519 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 GPR37L1O60883 481 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 SHOX2O60902 331 aaPredicted RBP9.94□□□□□ -0.82
USP39-215ENST00000481409 CSF2P04141 144 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 SERPINE1P05121 402 aa9.94□□□□□ -0.82
USP39-215ENST00000481409 SLC35G4P0C7Q5 338 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms