RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	GTF2A1L	Q9UNN4	478 aa		2.82	□□□□□ -1.96
CCNL1-223	ENST00000481173	RIPK3	Q9Y572	518 aa		2.82	□□□□□ -1.96
CCNL1-223	ENST00000481173	PCDHGA5	Q9Y5G8	931 aa		2.82	□□□□□ -1.96
CCNL1-223	ENST00000481173	SPIN1	Q9Y657	262 aa	Predicted RBP	2.82	□□□□□ -1.96
CCNL1-223	ENST00000481173	IGLV7-46	A0A075B6I9	117 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	TPD52L2	O43399	206 aa	Known RBP	2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	HS6ST1	O60243	411 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	CDC123	O75794	336 aa	Predicted RBP	2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	GH2	P01242	217 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	CAMP	P49913	170 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	SNX16	P57768	344 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	GAGE2B	Q13066	116 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	IK	Q13123	557 aa	Predicted RBP	2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	DLG2	Q15700	870 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	ASTE1	Q2TB18	679 aa	Predicted RBP	2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	SNAI3	Q3KNW1	292 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	GAGE2E	Q4V326	116 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	RARS2	Q5T160	578 aa	Known RBP	2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	GCNT6	Q5T4J0	391 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	JADE1	Q6IE81	842 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	GAGE2A	Q6NT46	116 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	KLHL35	Q6PF15	583 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	METTL7B	Q6UX53	244 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	TMTC3	Q6ZXV5	915 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	PXK	Q7Z7A4	578 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	ZNF554	Q86TJ5	538 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	BMPER	Q8N8U9	685 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	IL17RE	Q8NFR9	667 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	OR1J1	Q8NGS3	322 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	TDRD7	Q8NHU6	1098 aa	Known RBP	2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	FGFBP3	Q8TAT2	258 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	HSD17B8	Q92506	261 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	NSL1	Q96IY1	281 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	FAM81B	Q96LP2	452 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	AGAP3	Q96P47	875 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	SLC22A12	Q96S37	553 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	NCAPG	Q9BPX3	1015 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	RBM4B	Q9BQ04	359 aa	Known RBP	2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	TRIM51	Q9BSJ1	452 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	ACKR4	Q9NPB9	350 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	FAM120C	Q9NX05	1096 aa	Known RBP	2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	GAGE2D	Q9UEU5	116 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	CMAHP	Q9Y471	501 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	ZHX2	Q9Y6X8	837 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	ZNF318	Q5VUA4	2279 aa		2.81	□□□□□ -1.96
CCNL1-223	ENST00000481173	PRSS51	A0A1B0GVH4	220 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	ELOVL7	A1L3X0	281 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	FRMD3	A2A2Y4	597 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	PRR32	B1ATL7	298 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	NDUFS4	O43181	175 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	ACTN1	P12814	892 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	GATA1	P15976	413 aa	Predicted RBP	2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	PPARG	P37231	505 aa	Predicted RBP	2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	PCGF3	Q3KNV8	242 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	ZNF613	Q6PF04	617 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	SCYL3	Q8IZE3	742 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	AMER3	Q8N944	861 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	OR2T11	Q8NH01	316 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	OR4C3	Q8NH37	302 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	HPSE2	Q8WWQ2	592 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	PKP2	Q99959	881 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	SRSF8	Q9BRL6	282 aa	Known RBP	2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	ABHD6	Q9BV23	337 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	KAT14	Q9H8E8	782 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	A4GALT	Q9NPC4	353 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	DIAPH3	Q9NSV4	1193 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	TAB2	Q9NYJ8	693 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	LRWD1	Q9UFC0	647 aa		2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	2.8	□□□□□ -1.96
CCNL1-223	ENST00000481173	COL5A2	P05997	1499 aa	Predicted RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	SOS1	Q07889	1333 aa	Predicted RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173		A0A1W2PRB8	838 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	MED19	A0JLT2	244 aa	Predicted RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	SLCO1B7	G3V0H7	640 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	NPHP1	O15259	732 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	ATP6V0E1	O15342	81 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	SRSF10	O75494	262 aa	Known RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	RSL1D1	O76021	490 aa	Known RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	TPPP	O94811	219 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	PIGN	O95427	931 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	TBX18	O95935	607 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	SRPRA	P08240	638 aa	Known RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	PSMA4	P25789	261 aa	Known RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	SNRPE	P62304	92 aa	Known RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	DMPK	Q09013	629 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	GPR17	Q13304	367 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	HAUS3	Q68CZ6	603 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	FAM109B	Q6ICB4	259 aa	Predicted RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	DOK6	Q6PKX4	331 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	MMS22L	Q6ZRQ5	1243 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	IKBIP	Q70UQ0	350 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	GALNT5	Q7Z7M9	940 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	PIGZ	Q86VD9	579 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	ARID3B	Q8IVW6	561 aa	Predicted RBP	2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	TEX11	Q8IYF3	940 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	ZFAND2B	Q8WV99	257 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	UCMA	Q8WVF2	138 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	POMGNT1	Q8WZA1	660 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	SUSD6	Q92537	303 aa		2.79	□□□□□ -1.96
CCNL1-223	ENST00000481173	PSMD1	Q99460	953 aa		2.79	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms