RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 GBP5Q96PP8 586 aa16.81■□□□□ 0.28
HMGN1-212ENST00000479586 ATP13A2Q9NQ11 1180 aa16.81■□□□□ 0.28
HMGN1-212ENST00000479586 NUP210LQ5VU65 1888 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 GSAPA4D1B5 854 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 UMODP07911 640 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 COX6B1P14854 86 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 PVRP15151 417 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 HTR1EP28566 365 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 ARSEP51690 589 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 KCNK10P57789 538 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 PRKAA1Q13131 559 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 DPYSL3Q14195 570 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 SLC9A5Q14940 896 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 ZFYVE27Q5T4F4 411 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 CCDC183Q5T5S1 534 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 BEND7Q8N7W2 519 aaPredicted RBP16.8■□□□□ 0.28
HMGN1-212ENST00000479586 CCNYQ8ND76 341 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 OR2Y1Q8NGV0 311 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 FAM71BQ8TC56 605 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 ZFPM2Q8WW38 1151 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 ERGIC2Q96RQ1 377 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 NRTNQ99748 197 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 CEP41Q9BYV8 373 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 MRPL47Q9HD33 250 aaKnown RBP16.8■□□□□ 0.28
HMGN1-212ENST00000479586 FANCLQ9NW38 375 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 GPN3Q9UHW5 284 aaPredicted RBP16.8■□□□□ 0.28
HMGN1-212ENST00000479586 CDYLQ9Y232 598 aa16.8■□□□□ 0.28
HMGN1-212ENST00000479586 NIPBLQ6KC79 2804 aaeCLIP16.8■□□□□ 0.28
HMGN1-212ENST00000479586 ANKRD12Q6UB98 2062 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 CCDC78A2IDD5 438 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 DDX3XO00571 662 aaKnown RBP eCLIP16.79■□□□□ 0.286e-16■■■■□ 25.2
HMGN1-212ENST00000479586 UGT1A9O60656 530 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 DIAPH2O60879 1101 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 JRKO75564 520 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 HBQ1P09105 142 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 GZMAP12544 262 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 UGT1A6P19224 532 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 UGT1A1P22309 533 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 UGT1A4P22310 534 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 PRDX3P30048 256 aaKnown RBP16.79■□□□□ 0.28
HMGN1-212ENST00000479586 SLC10A2Q12908 348 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-212ENST00000479586 AIMP2Q13155 320 aaKnown RBP16.79■□□□□ 0.28
HMGN1-212ENST00000479586 PIGHQ14442 188 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-212ENST00000479586 CT47A1Q5JQC4 288 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-212ENST00000479586 FAM180AQ6UWF9 173 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 IGFL2Q6UWQ7 119 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 BNC2Q6ZN30 1099 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-212ENST00000479586 CDHR3Q6ZTQ4 885 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 ZNF571Q7Z3V5 609 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-212ENST00000479586 ZNF295-AS1Q8N0V1 137 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 NAT14Q8WUY8 206 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 HDAC11Q96DB2 347 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 C17orf62Q9BQA9 187 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 ZCCHC2Q9C0B9 1178 aaKnown RBP16.79■□□□□ 0.28
HMGN1-212ENST00000479586 HAUS4Q9H6D7 363 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 UGT1A7Q9HAW7 530 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 UGT1A10Q9HAW8 530 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 UGT1A8Q9HAW9 530 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 IL26Q9NPH9 171 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 OLAHQ9NV23 265 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 FAM8A1Q9UBU6 413 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 NDOR1Q9UHB4 597 aa16.79■□□□□ 0.28
HMGN1-212ENST00000479586 AGPSO00116 658 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 GJC1P36383 396 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 OTUD4Q01804 1114 aaKnown RBP16.78■□□□□ 0.28
HMGN1-212ENST00000479586 ATP13A4Q4VNC1 1196 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 FNBP1LQ5T0N5 605 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 B3GNTL1Q67FW5 361 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-212ENST00000479586 NIPA2Q8N8Q9 360 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 PTERQ96BW5 349 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 IMP4Q96G21 291 aaKnown RBP16.78■□□□□ 0.28
HMGN1-212ENST00000479586 RMDN2Q96LZ7 410 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 PITPNM3Q9BZ71 974 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 SLC6A20Q9NP91 592 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 CHST11Q9NPF2 352 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 IFT80Q9P2H3 777 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-212ENST00000479586 LIMA1Q9UHB6 759 aaKnown RBP16.78■□□□□ 0.28
HMGN1-212ENST00000479586 FBXL4Q9UKA2 621 aa16.78■□□□□ 0.28
HMGN1-212ENST00000479586 DNMT3AQ9Y6K1 912 aaPredicted RBP16.78■□□□□ 0.28
HMGN1-212ENST00000479586 CCDC66A2RUB6 948 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 BTN3A3O00478 584 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 BTN3A1O00481 513 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 SLC35G4P0C7Q5 338 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 MYBL1P10243 752 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 MX2P20592 715 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 SSR1P43307 286 aaKnown RBP16.77■□□□□ 0.28
HMGN1-212ENST00000479586 KRTAP10-9P60411 292 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 IFI35P80217 286 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-212ENST00000479586 ZNF630Q2M218 657 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-212ENST00000479586 LDLRAP1Q5SW96 308 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 GPRC6AQ5T6X5 926 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 AGAP7PQ5VUJ5 663 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 PRAMEF13Q5VWM6 474 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 E4F1Q66K89 784 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-212ENST00000479586 FAM151BQ6UXP7 276 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 SPNS3Q6ZMD2 512 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 DET1Q7L5Y6 550 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 MRGPRGQ86SM5 289 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 GPR135Q8IZ08 494 aa16.77■□□□□ 0.28
HMGN1-212ENST00000479586 PQLC3Q8N755 202 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms