RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 C16orf72Q14CZ0 275 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 CHRNA6Q15825 494 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 PDCD4Q53EL6 469 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 FGD3Q5JSP0 725 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 SPOUT1Q5T280 376 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 BORAQ6PGQ7 559 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 MILR1Q7Z6M3 343 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 ERI1Q8IV48 349 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 C10orf111Q8N326 155 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 ISG20Q96AZ6 181 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 DTNBP1Q96EV8 351 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 MYO19Q96H55 970 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 IGSF21Q96ID5 467 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 TBCDQ9BTW9 1192 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 NPLQ9BXD5 320 aaPredicted RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 TRIM15Q9C019 465 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 CLPBQ9H078 707 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 COMMD8Q9NX08 183 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 AFF4Q9UHB7 1163 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 ANAPC2Q9UJX6 822 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 TMCO1Q9UM00 188 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 CPQQ9Y646 472 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 UPK3BL1B0FP48 263 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 UPK3BL2E5RIL1 263 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 H0Y858 1186 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 PRRG1O14668 218 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 COL6A1P12109 1028 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 BPIP17213 487 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 EEF1B2P24534 225 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 NFKBIAP25963 317 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 RPS9P46781 194 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 EMX2Q04743 252 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 DCTN2Q13561 401 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 RAB39AQ14964 217 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 NKG7Q16617 165 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 INTS11Q5TA45 600 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 KLHL35Q6PF15 583 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 ENPP6Q6UWR7 440 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 XKR5Q6UX68 686 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 PHACTR4Q8IZ21 702 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 FBXO30Q8TB52 745 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 C2orf15Q8WU43 125 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 AURKBQ96GD4 344 aaPredicted RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 MUS81Q96NY9 551 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 CDK5RAP1Q96SZ6 601 aaKnown RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 C9orf16Q9BUW7 83 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 CXorf21Q9HAI6 301 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 NTN4Q9HB63 628 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 ZFYVE1Q9HBF4 777 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
VPS52-217ENST00000478934 EXD2Q9NVH0 621 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 RIC8BQ9NVN3 520 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 KLQ9UEF7 1012 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 CCL27Q9Y4X3 112 aa10.62□□□□□ -0.71
VPS52-217ENST00000478934 H7C0S8 307 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 ABLIM3O94929 683 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 RASAL1O95294 804 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 HMOX2P30519 316 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 CD70P32970 193 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 NEK2P51955 445 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 SMARCB1Q12824 385 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 NFATC2Q13469 925 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 MYBPC3Q14896 1274 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 ZXDCQ2QGD7 858 aaPredicted RBP10.61□□□□□ -0.71
VPS52-217ENST00000478934 FAM174BQ3ZCQ3 159 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 DGKKQ5KSL6 1271 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 ACBD5Q5T8D3 534 aaPredicted RBP10.61□□□□□ -0.71
VPS52-217ENST00000478934 DUS1LQ6P1R4 473 aaKnown RBP10.61□□□□□ -0.71
VPS52-217ENST00000478934 KCTD8Q6ZWB6 473 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 SPRED1Q7Z699 444 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 PTRH1Q86Y79 214 aaKnown RBP10.61□□□□□ -0.71
VPS52-217ENST00000478934 HID1Q8IV36 788 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 RNF175Q8N4F7 328 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 DHRSXQ8N5I4 330 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 MFSD2AQ8NA29 543 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 PDZD8Q8NEN9 1154 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 FIG4Q92562 907 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 SMPD3Q9NY59 655 aaPredicted RBP10.61□□□□□ -0.71
VPS52-217ENST00000478934 NUDT4Q9NZJ9 180 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 DNAH14Q0VDD8 3507 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 A0A087WXM4 84 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 LOC730098B7Z3J9 87 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 NOBOXO60393 691 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 ZNF821O75541 412 aaPredicted RBP10.61□□□□□ -0.71
VPS52-217ENST00000478934 EFEMP2O95967 443 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 SHMT2P34897 504 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 CA8P35219 290 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 ADRM1Q16186 407 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 SUSD1Q6UWL2 747 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 DET1Q7L5Y6 550 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 GPR180Q86V85 440 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 LRRC43Q8N309 656 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 GPR26Q8NDV2 337 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 OR10A6Q8NH74 314 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 CGREF1Q99674 301 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 SEZ6LQ9BYH1 1024 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 LATS2Q9NRM7 1088 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 ZIM2Q9NZV7 527 aa10.61□□□□□ -0.71
VPS52-217ENST00000478934 PTBP2Q9UKA9 531 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms