RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, human

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS27A-208	ENST00000478196	MT3	P25713	68 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	HLA-F	P30511	346 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	SDC4	P31431	198 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	CD70	P32970	193 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	RDX	P35241	583 aa	Known RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	CHKA	P35790	457 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TNFRSF4	P43489	277 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	SLC11A2	P49281	568 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ZNF135	P52742	658 aa	Predicted RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	PLK1	P53350	603 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	SATB1	Q01826	763 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	DEUP1	Q05D60	604 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	KDSR	Q06136	332 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	DMWD	Q09019	674 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TCF15	Q12870	199 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	LMAN2	Q12907	356 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	NME3	Q13232	169 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	GOLGA4	Q13439	2230 aa	Known RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ENPP2	Q13822	863 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	KRT81	Q14533	505 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	CA9	Q16790	459 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	CDO1	Q16878	200 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TBC1D25	Q3MII6	688 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	MPPE1	Q53F39	396 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ALF	Q53S48	1182 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TDRD12	Q587J7	1177 aa	Known RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	BRMS1L	Q5PSV4	323 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	CCDC122	Q5T0U0	273 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	C10orf25	Q5T742	122 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ICE2	Q659A1	982 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	CXorf57	Q6NSI4	855 aa	Known RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	PPP1R2P3	Q6NXS1	205 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	FBXL22	Q6P050	247 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	C1orf228	Q6PIY5	440 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196		Q6ZTC4	211 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	STRADA	Q7RTN6	431 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ADIPOR2	Q86V24	386 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	NLRP14	Q86W24	1093 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	FAM131B	Q86XD5	332 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	LGI2	Q8N0V4	545 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	PYROXD2	Q8N2H3	581 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	CBARP	Q8N350	705 aa	Predicted RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ASCC3	Q8N3C0	2202 aa	Known RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	NIPA2	Q8N8Q9	360 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TERB1	Q8NA31	727 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	IL17RC	Q8NAC3	791 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	HJURP	Q8NCD3	748 aa	Predicted RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	FIBIN	Q8TAL6	211 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	NTAN1	Q96AB6	310 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ZNF653	Q96CK0	615 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TMA16	Q96EY4	203 aa	Known RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ALG14	Q96F25	216 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ACOX2	Q99424	681 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ANP32E	Q9BTT0	268 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	SELENOO	Q9BVL4	669 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TRPM6	Q9BX84	2022 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	SLC2A11	Q9BYW1	496 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	TKTL2	Q9H0I9	626 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	MFSD1	Q9H3U5	465 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	GPR35	Q9HC97	309 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	ZDHHC4	Q9NPG8	344 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	PRMT8	Q9NR22	394 aa	Predicted RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	PARVA	Q9NVD7	372 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	DEC1	Q9P2X7	70 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	VANGL2	Q9ULK5	521 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	STAP1	Q9ULZ2	295 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	MRPS17	Q9Y2R5	130 aa	Known RBP	4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	OR51B4	Q9Y5P0	310 aa		4.08	□□□□□ -1.76
RPS27A-208	ENST00000478196	PCNX2	A6NKB5	2137 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	CEP295	Q9C0D2	2601 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196		A0A0U1RQJ8	604 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196		A0A1W2PQF6	199 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	EIF3CL	B5ME19	914 aa	Known RBP	4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	WASH3P	C4AMC7	463 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196		E9PAM4	449 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196		F5H5T6	163 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	SGK1	O00141	431 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	ZMPSTE24	O75844	475 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	MTA2	O94776	668 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	PROSC	O94903	275 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	LUC7L3	O95232	432 aa	Known RBP	4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	CD160	O95971	181 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	APOE	P02649	317 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	APOD	P05090	189 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	H2AFZ	P0C0S5	128 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	IL4R	P24394	825 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	PSMA2	P25787	234 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	MIP	P30301	263 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	HOXA6	P31267	233 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	PCK1	P35558	622 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	MAGEA9	P43362	315 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	ARSE	P51690	589 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	CLCN2	P51788	898 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	SLC16A1	P53985	500 aa		4.07	□□□□□ -1.76
RPS27A-208	ENST00000478196	TAS2R40	P59535	323 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms