RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 TIPARPQ7Z3E1 657 aaKnown RBP21.2■□□□□ 0.98
COL9A3-211ENST00000477612 OOSP2Q86WS3 158 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 KMT5CQ86Y97 462 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 CARFQ8N187 725 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 ACVR1CQ8NER5 493 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 OR4L1Q8NH43 312 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.2■□□□□ 0.98
COL9A3-211ENST00000477612 PBKQ96KB5 322 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 TRIT1Q9H3H1 467 aaKnown RBP21.2■□□□□ 0.98
COL9A3-211ENST00000477612 HRASLS2Q9NWW9 162 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 PCDHGA4Q9Y5G9 962 aa21.2■□□□□ 0.98
COL9A3-211ENST00000477612 IGHV5-51A0A0C4DH38 117 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 IFRD1O00458 451 aaPredicted RBP21.19■□□□□ 0.98
COL9A3-211ENST00000477612 LIN7AO14910 233 aaPredicted RBP21.19■□□□□ 0.98
COL9A3-211ENST00000477612 FGF5P12034 268 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 TPSB2P20231 275 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 PDHA2P29803 388 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 NPY2RP49146 381 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 SH3BP2P78314 561 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 TPSAB1Q15661 275 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 KIAA1614Q5VZ46 1190 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 ZNF449Q6P9G9 518 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 GSTA5Q7RTV2 222 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 NLGN4XQ8N0W4 816 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 IL22RA1Q8N6P7 574 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 ZSCAN1Q8NBB4 408 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 PPHLN1Q8NEY8 458 aaKnown RBP21.19■□□□□ 0.98
COL9A3-211ENST00000477612 NLGN4YQ8NFZ3 816 aaPredicted RBP21.19■□□□□ 0.98
COL9A3-211ENST00000477612 JPH3Q8WXH2 748 aaPredicted RBP21.19■□□□□ 0.98
COL9A3-211ENST00000477612 TTC1Q99614 292 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 MAP3K3Q99759 626 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 MVB12BQ9H7P6 319 aa21.19■□□□□ 0.98
COL9A3-211ENST00000477612 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.18■□□□□ 0.98
COL9A3-211ENST00000477612 TLCD2A6NGC4 264 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 EIF4E1BA6NMX2 242 aaKnown RBP21.18■□□□□ 0.98
COL9A3-211ENST00000477612 STK17BO94768 372 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 FTH1P02794 183 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 ITGB2P05107 769 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 BASP1P80723 227 aaKnown RBP21.18■□□□□ 0.98
COL9A3-211ENST00000477612 FOXM1Q08050 763 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 ABHD18Q0P651 414 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 LRRC8BQ6P9F7 803 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 CYB5D1Q6P9G0 228 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 OR6C1Q96RD1 312 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 IL22Q9GZX6 179 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 TFB2MQ9H5Q4 396 aaKnown RBP21.18■□□□□ 0.98
COL9A3-211ENST00000477612 CHRAC1Q9NRG0 131 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 TREX1Q9NSU2 369 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 WDR70Q9NW82 654 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 COL6A6A6NMZ7 2263 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 ATRXP46100 2492 aa21.18■□□□□ 0.98
COL9A3-211ENST00000477612 SLC5A10A0PJK1 596 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 OR56A5P0C7T3 313 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 MAGEA6P43360 314 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 PRAMEP78395 509 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 PLOD1Q02809 727 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-211ENST00000477612 BOP1Q14137 746 aaKnown RBP21.17■□□□□ 0.98
COL9A3-211ENST00000477612 CYP1B1Q16678 543 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 TAF1BQ53T94 588 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-211ENST00000477612 BPHLQ86WA6 291 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-211ENST00000477612 OR6P1Q8NGX9 317 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 TFGQ92734 400 aaPredicted RBP21.17■□□□□ 0.98
COL9A3-211ENST00000477612 FCRL4Q96PJ5 515 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 FERD3LQ96RJ6 166 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 SLC12A9Q9BXP2 914 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 MRM3Q9HC36 420 aaKnown RBP21.17■□□□□ 0.98
COL9A3-211ENST00000477612 BFARQ9NZS9 450 aa21.17■□□□□ 0.98
COL9A3-211ENST00000477612 OR6C74A6NCV1 312 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 F8W8V4 182 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 MATN2O00339 956 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 OR1I1O60431 355 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 C1QL1O75973 258 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 LIFP15018 202 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 ACADLP28330 430 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 PPARGP37231 505 aaPredicted RBP21.16■□□□□ 0.98
COL9A3-211ENST00000477612 SESN2P58004 480 aaPredicted RBP21.16■□□□□ 0.98
COL9A3-211ENST00000477612 KRT33BQ14525 404 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 SEMA3AQ14563 771 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.16■□□□□ 0.98
COL9A3-211ENST00000477612 FASTKD1Q53R41 847 aaKnown RBP21.16■□□□□ 0.98
COL9A3-211ENST00000477612 DNTTIP2Q5QJE6 756 aaKnown RBP21.16■□□□□ 0.98
COL9A3-211ENST00000477612 ARMC3Q5W041 872 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 D2HGDHQ8N465 521 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 EFHD1Q9BUP0 239 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 KIFC1Q9BW19 673 aa21.16■□□□□ 0.98
COL9A3-211ENST00000477612 LOC101059948A0A1B0GTJ6 334 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 ZSCAN12O43309 604 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 ZNF28P17035 718 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 PREPP48147 710 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 KPNA2P52292 529 aaKnown RBP21.15■□□□□ 0.98
COL9A3-211ENST00000477612 ACY1Q03154 408 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 KCNJ11Q14654 390 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 LINC00303Q3SY05 128 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 AARS2Q5JTZ9 985 aaKnown RBP21.15■□□□□ 0.98
COL9A3-211ENST00000477612 TTC27Q6P3X3 843 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 ESX1Q8N693 406 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 SIDT2Q8NBJ9 832 aaKnown RBP21.15■□□□□ 0.98
COL9A3-211ENST00000477612 PHC3Q8NDX5 983 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 OR4E2Q8NGC2 313 aa21.15■□□□□ 0.98
COL9A3-211ENST00000477612 ELMO1Q92556 727 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms