RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SH3D21A4FU49 640 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 TPSB2P20231 275 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 DGKEP52429 567 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 EVX2Q03828 476 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 TPSAB1Q15661 275 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 TAC4Q86UU9 113 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 SLC22A15Q8IZD6 547 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 MED28Q9H204 178 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 CYP3A5P20815 502 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 CDH12P55289 794 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 REP15Q6BDI9 236 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 OR2T34Q8NGX1 318 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 OR2T3Q8NH03 318 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 CHCHD6Q9BRQ6 235 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 TESMINQ9Y4I5 508 aa18.33■□□□□ 0.52
VARS2-209ENST00000477288 hCG_2039718K7EN88 272 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 OGNP20774 298 aaKnown RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 DHPSP49366 369 aaPredicted RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 PRR5P85299 388 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 ARSHQ5FYA8 562 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 TATDN1Q6P1N9 297 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 AAGABQ6PD74 315 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 IRF2BP2Q7Z5L9 587 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 UBE2J2Q8N2K1 259 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 SGCDQ92629 289 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 ZNF570Q96NI8 536 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 GFM1Q96RP9 751 aaKnown RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 MAGEH1Q9H213 219 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 NR4A1P22736 598 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 AZGP1P25311 298 aaKnown RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 PSMA1P25786 263 aaKnown RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 GDI2P50395 445 aaKnown RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 TAS2R50P59544 299 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 KLF10Q13118 480 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 SPRYD7Q5W111 196 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 PQLC1Q8N2U9 271 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 OR10H4Q8NGA5 316 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 INPP4AQ96PE3 977 aaPredicted RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 FAM149AA5PLN7 773 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 ANXA2P2A6NMY6 339 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 CCNKO75909 580 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 ANXA2P07355 339 aaKnown RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 ZBTB48P10074 688 aaPredicted RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 ZFP69Q49AA0 526 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 PPM1JQ5JR12 505 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 PYROXD2Q8N2H3 581 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 TSTD1Q8NFU3 115 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 HMGB4Q8WW32 186 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 TCAF1Q9Y4C2 921 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 PLK4O00444 970 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 CPN2P22792 545 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 GRK6P43250 576 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 E2F2Q14209 437 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 PUM1Q14671 1186 aaKnown RBP eCLIP18.32■□□□□ 0.52
VARS2-209ENST00000477288 NUP54Q7Z3B4 507 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 HEBP2Q9Y5Z4 205 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 TM7SF2O76062 418 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 PAPSS2O95340 614 aaPredicted RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 CRHR1P34998 444 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 PLA2G16P53816 162 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 CLCQ05315 142 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 LCN1P1Q5VSP4 162 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 THAP5Q7Z6K1 395 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 RAB43Q86YS6 212 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 ARL10Q8N8L6 244 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 HM13Q8TCT9 377 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 DPYSL5Q9BPU6 564 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 C11orf84Q9BUA3 381 aaPredicted RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 MRPS30Q9NP92 439 aaKnown RBP18.32■□□□□ 0.52
VARS2-209ENST00000477288 EURLQ9NYK6 297 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 SNX7Q9UNH6 387 aa18.32■□□□□ 0.52
VARS2-209ENST00000477288 PLGP00747 810 aaPredicted RBP18.31■□□□□ 0.52
VARS2-209ENST00000477288 C4BPAP04003 597 aaKnown RBP18.31■□□□□ 0.52
VARS2-209ENST00000477288 TIE1P35590 1138 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 OR4C6Q8NH72 309 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 CLPTM1LQ96KA5 538 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 CPED1A4D0V7 1026 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 ECHS1P30084 290 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 AP1S1P61966 158 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 PRKCZQ05513 592 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 C2orf27AQ580R0 203 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 HBEGFQ99075 208 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 SP140LQ9H930 580 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 FKBPLQ9UIM3 349 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 PCP4L1A6NKN8 68 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 TLX3O43711 291 aaPredicted RBP18.31■□□□□ 0.52
VARS2-209ENST00000477288 CCNB2O95067 398 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 BLKP51451 505 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 CLCN7P51798 805 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 DGLUCYQ7Z3D6 616 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 COX18Q8N8Q8 333 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 LRRC4CQ9HCJ2 640 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 PNO1Q9NRX1 252 aaKnown RBP18.31■□□□□ 0.52
VARS2-209ENST00000477288 ZNF221Q9UK13 617 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 RBMX2Q9Y388 322 aaKnown RBP18.31■□□□□ 0.52
VARS2-209ENST00000477288 LYPLA2O95372 231 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 SEMG2Q02383 582 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 PYHIN1Q6K0P9 492 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 SUN3Q8TAQ9 357 aa18.31■□□□□ 0.52
VARS2-209ENST00000477288 TOP1MTQ969P6 601 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms