RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 GDF5P43026 501 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 BNIP2Q12982 314 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 KIAA0040Q15053 153 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 FXNQ16595 210 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 ZXDCQ2QGD7 858 aaPredicted RBP11.28□□□□□ -0.6
NUP188-205ENST00000477069 LRRC73Q5JTD7 316 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 CDKL4Q5MAI5 379 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 LY6G5CQ5SRR4 150 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 EP400NLQ6ZTU2 488 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 KIAA2013Q8IYS2 634 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 AHI1Q8N157 1196 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 DPP10Q8N608 796 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 TBC1D14Q9P2M4 693 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 TRPS1Q9UHF7 1281 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 CNOT6Q9ULM6 557 aaKnown RBP11.28□□□□□ -0.6
NUP188-205ENST00000477069 CCDC154A6NI56 674 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 AQP12BA6NM10 295 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 KATNA1O75449 491 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 DCDC1P59894 354 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 NTHL1P78549 312 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 CDKL1Q00532 357 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 PPIGQ13427 754 aaKnown RBP eCLIP11.28□□□□□ -0.63e-7■■□□□ 13.3
NUP188-205ENST00000477069 RFTN2Q52LD8 501 aaPredicted RBP11.28□□□□□ -0.6
NUP188-205ENST00000477069 TMEM240Q5SV17 173 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 BRAT1Q6PJG6 821 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 MBOAT1Q6ZNC8 495 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 TRIM46Q7Z4K8 759 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 MILR1Q7Z6M3 343 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 PTRH1Q86Y79 214 aaKnown RBP11.28□□□□□ -0.6
NUP188-205ENST00000477069 AQP12AQ8IXF9 295 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 LEMD2Q8NC56 503 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 FAM110BQ8TC76 370 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 LRTOMTQ8WZ04 291 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 HBEGFQ99075 208 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 WWOXQ9NZC7 414 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 SLAMF8Q9P0V8 285 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 PDP2Q9P2J9 529 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 OPTCQ9UBM4 332 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 LEF1Q9UJU2 399 aaPredicted RBP11.28□□□□□ -0.6
NUP188-205ENST00000477069 FBXO10Q9UK96 956 aa11.28□□□□□ -0.6
NUP188-205ENST00000477069 LAMA3Q16787 3333 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 MAP3K13O43283 966 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 SGTAO43765 313 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 NUAK1O60285 661 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 RSL1D1O76021 490 aaKnown RBP11.27□□□□□ -0.6
NUP188-205ENST00000477069 WDR47O94967 919 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 NPPAP01160 153 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 EBLN1P0CF75 366 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 HSPA8P11142 646 aaKnown RBP11.27□□□□□ -0.6
NUP188-205ENST00000477069 G6PDP11413 515 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 EPCAMP16422 314 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 ZNF30P17039 623 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 JAK1P23458 1154 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 IRS1P35568 1242 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.6
NUP188-205ENST00000477069 NFYCQ13952 458 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 PDK3Q15120 406 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 SMU1Q2TAY7 513 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 FOXB2Q5VYV0 432 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 RASGRP3Q8IV61 690 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 GOLM1Q8NBJ4 401 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 USP7Q93009 1102 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 EGFL8Q99944 293 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 TRIM8Q9BZR9 551 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 ABCG8Q9H221 673 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 ACTR3BQ9P1U1 418 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 NFKBIL1Q9UBC1 381 aaPredicted RBP11.27□□□□□ -0.6
NUP188-205ENST00000477069 SUN2Q9UH99 717 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 PDE10AQ9Y233 779 aa11.27□□□□□ -0.6
NUP188-205ENST00000477069 COL4A3Q01955 1670 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 DYTNA2CJ06 578 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 H0YJX3 145 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 CTSLP07711 333 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 ZCCHC18P0CG32 403 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 VIPR1P32241 457 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 POLR2LP62875 67 aaKnown RBP11.27□□□□□ -0.61
NUP188-205ENST00000477069 TIGD2Q4W5G0 525 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 TTC23LQ6PF05 361 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 CYP20A1Q6UW02 462 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 HSD11B1LQ7Z5J1 315 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 SPRED2Q7Z698 418 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 HOMEZQ8IX15 550 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 BADQ92934 168 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 OTUB2Q96DC9 234 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 SLC12A9Q9BXP2 914 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 SLC2A11Q9BYW1 496 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 CCM2LQ9NUG4 571 aaPredicted RBP11.27□□□□□ -0.61
NUP188-205ENST00000477069 PKD2L2Q9NZM6 624 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 CD84Q9UIB8 345 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 ZMYM5Q9UJ78 669 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 WNT6Q9Y6F9 365 aa11.27□□□□□ -0.61
NUP188-205ENST00000477069 KIAA1549LQ6ZVL6 1849 aa11.26□□□□□ -0.61
NUP188-205ENST00000477069 ZNF839A8K0R7 811 aa11.26□□□□□ -0.61
NUP188-205ENST00000477069 TTC34A8MYJ7 566 aa11.26□□□□□ -0.61
NUP188-205ENST00000477069 ARNTLO00327 626 aa11.26□□□□□ -0.61
NUP188-205ENST00000477069 ENO2P09104 434 aaPredicted RBP11.26□□□□□ -0.61
NUP188-205ENST00000477069 HNRNPA1P09651 372 aaKnown RBP eCLIP11.26□□□□□ -0.61
NUP188-205ENST00000477069 OR56A5P0C7T3 313 aa11.26□□□□□ -0.61
NUP188-205ENST00000477069 GRIA3P42263 894 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms