RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 CDH19Q9H159 772 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 LRRN3Q9H3W5 708 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 GEMIN8Q9NWZ8 242 aaKnown RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 MPP6Q9NZW5 540 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 PISDQ9UG56 409 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 MAN1B1Q9UKM7 699 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 CA5BQ9Y2D0 317 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 ATP8A1Q9Y2Q0 1164 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 PCDHGA3Q9Y5H0 932 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 U3KQA8 63 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 UBR5O95071 2799 aaPredicted RBP3.5□□□□□ -1.85
XRN1-209ENST00000472625 COL12A1Q99715 3063 aa3.5□□□□□ -1.85
XRN1-209ENST00000472625 RELNP78509 3460 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ARHGAP42A6NI28 874 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 BECN2A8MW95 431 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 B4E171 279 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 F8VZ95 297 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 K7ERQ8 282 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PSMD11O00231 422 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PES1O00541 588 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 GPR39O43194 453 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 DUX1O43812 170 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 SOCS5O75159 536 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 H2AFYO75367 372 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 PRKD3O94806 890 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ENDOD1O94919 500 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 LPLP06858 475 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 KRT3P12035 628 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CA4P22748 312 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 MMP8P22894 467 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PON1P27169 355 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 TEAD1P28347 426 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 EPHB2P29323 1055 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 SERPINB6P35237 376 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ADRA1BP35368 520 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 MMP12P39900 470 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CASRP41180 1078 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 TSPAN7P41732 249 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CSNK1DP48730 415 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 NDST2P52849 883 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PITX1P78337 314 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 CDR2Q01850 454 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ZFP36L1Q07352 338 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 BCL2L1Q07817 233 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 EIF2B5Q13144 721 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 HLTFQ14527 1009 aaKnown RBP eCLIP3.49□□□□□ -1.85
XRN1-209ENST00000472625 NR1D2Q14995 579 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 IRF4Q15306 451 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 UGP2Q16851 508 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ALG11Q2TAA5 492 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 KLHL40Q2TBA0 621 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 FKBP15Q5T1M5 1219 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 DCAF12Q5T6F0 453 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 MANEALQ5VSG8 457 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 OTUD1Q5VV17 481 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 KIAA1614Q5VZ46 1190 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CRTC1Q6UUV9 634 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ENPP7Q6UWV6 458 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CEACAM20Q6UY09 585 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 Q6ZRM9 215 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 USP45Q70EL2 814 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 BNIPLQ7Z465 357 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 TAF8Q7Z7C8 310 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 SLFN11Q7Z7L1 901 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 SLC47A2Q86VL8 602 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 NLRP14Q86W24 1093 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 XYLT1Q86Y38 959 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CREBRFQ8IUR6 639 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PSTKQ8IV42 348 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 ZNF683Q8IZ20 524 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 RBFAQ8N0V3 343 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 UMODL1-AS1Q8N2C9 162 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CBARPQ8N350 705 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 CDYL2Q8N8U2 506 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 C3orf20Q8ND61 904 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 FAM46DQ8NEK8 389 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 GPR156Q8NFN8 814 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 OR7D4Q8NG98 312 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 OR4D9Q8NGE8 314 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 OR10G6Q8NH81 332 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ZNF564Q8TBZ8 553 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 NSMCE1Q8WV22 266 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 HOXB13Q92826 284 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 SH3KBP1Q96B97 665 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PRR11Q96HE9 360 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 AHCYL2Q96HN2 611 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 CFAP57Q96MR6 1250 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 KLHL32Q96NJ5 620 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ZNF599Q96NL3 588 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 TAAR9Q96RI9 348 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CRACR2AQ9BSW2 395 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 WRAP53Q9BUR4 548 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 APOOQ9BUR5 198 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 SELENOOQ9BVL4 669 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 CINPQ9BW66 212 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 STK33Q9BYT3 514 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 NELFAQ9H3P2 528 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 NDST4Q9H3R1 872 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms