RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 SPPL2CQ8IUH8 684 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 JOSD2Q8TAC2 188 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 GSDMAQ96QA5 445 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 MGME1Q9BQP7 344 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 ZSCAN5AQ9BUG6 496 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 SELENOOQ9BVL4 669 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 NAA15Q9BXJ9 866 aaKnown RBP9.91□□□□□ -0.82
CDHR3-209ENST00000472116 FZD10Q9ULW2 581 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 PPT2Q9UMR5 302 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 PLEKHA6Q9Y2H5 1048 aa9.91□□□□□ -0.82
CDHR3-209ENST00000472116 FAM227AF5H4B4 570 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 FOXN3O00409 490 aaPredicted RBP9.9□□□□□ -0.82
CDHR3-209ENST00000472116 OR2B3O76000 313 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 USP1O94782 785 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 KLHL18O94889 574 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 CDK14O94921 469 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 SLCO2B1O94956 709 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 PDHA1P08559 390 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 UNGP13051 313 aaPredicted RBP9.9□□□□□ -0.82
CDHR3-209ENST00000472116 POLR2CP19387 275 aaPredicted RBP9.9□□□□□ -0.82
CDHR3-209ENST00000472116 HLA-DPA1P20036 260 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 ITGAXP20702 1163 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 LMAN1P49257 510 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 STX17P56962 302 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 ITKQ08881 620 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 PNOCQ13519 176 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 RPE65Q16518 533 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 KRTCAP3Q53RY4 240 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 PPP1R15BQ5SWA1 713 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 RHBDD2Q6NTF9 364 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 TTI2Q6NXR4 508 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 CREBRFQ8IUR6 639 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 DMRTC2Q8IXT2 367 aaPredicted RBP9.9□□□□□ -0.82
CDHR3-209ENST00000472116 TTC25Q96NG3 672 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 ZNF395Q9H8N7 513 aaPredicted RBP9.9□□□□□ -0.82
CDHR3-209ENST00000472116 DNAJC12Q9UKB3 198 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 POMT2Q9UKY4 750 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 PSMD13Q9UNM6 376 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 WDR37Q9Y2I8 494 aa9.9□□□□□ -0.82
CDHR3-209ENST00000472116 TLN2Q9Y4G6 2542 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 CHD3Q12873 2000 aaKnown RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 RNF212BA8MTL3 300 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 IDSB3KWA1 339 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 EIF3CLB5ME19 914 aaKnown RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 E9PLN8 166 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 PRRG2O14669 202 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 ZNF202O95125 648 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 FGFR1OPO95684 399 aaKnown RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 TSPAN12O95859 305 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 F13A1P00488 732 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 PNMA6AP0CW24 399 aaPredicted RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 PIM1P11309 404 aaPredicted RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 MTHFD1P11586 935 aaKnown RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 IGFBP2P18065 325 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 MMP13P45452 471 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 NOMO3P69849 1222 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 GALNT3Q14435 633 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 KRT33BQ14525 404 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 NKAIN1Q4KMZ8 207 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 MARC1Q5VT66 337 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 ALS2CLQ60I27 953 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 PDPK2PQ6A1A2 396 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 KLHL10Q6JEL2 608 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 MRPL14Q6P1L8 145 aaKnown RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 Q6ZPB1 254 aaPredicted RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 AMZ2Q86W34 360 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 FAM71AQ8IYT1 594 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 CLYBLQ8N0X4 340 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 PGBD5Q8N414 524 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 GOT1L1Q8NHS2 421 aaPredicted RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 AGAP11Q8TF27 550 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 THAP3Q8WTV1 239 aaPredicted RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 ASB5Q8WWX0 329 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 HAS2Q92819 552 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 SMARCE1Q969G3 411 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 GLYATL1Q969I3 302 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 PPM1MQ96MI6 270 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 SMIM14Q96QK8 99 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 EIF3CQ99613 913 aaKnown RBP9.89□□□□□ -0.83
CDHR3-209ENST00000472116 VKORC1Q9BQB6 163 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 C11orf70Q9BRQ4 267 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 KCNJ16Q9NPI9 418 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 RAD18Q9NS91 495 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 HAUS2Q9NVX0 235 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 FANCLQ9NW38 375 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 PLA2G3Q9NZ20 509 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 PTGFRNQ9P2B2 879 aa9.89□□□□□ -0.83
CDHR3-209ENST00000472116 FAM90A27PA6NNH2 459 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 SOCS6O14544 535 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 CCP110O43303 1012 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 PROM1O43490 865 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 ZSCAN22P10073 491 aaPredicted RBP9.88□□□□□ -0.83
CDHR3-209ENST00000472116 ERCC2P18074 760 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 FDXRP22570 491 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 NDUFS1P28331 727 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 SPAM1P38567 509 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 FOXL2P58012 376 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 APBA1Q02410 837 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 CACNG1Q06432 222 aa9.88□□□□□ -0.83
CDHR3-209ENST00000472116 KIRREL2Q6UWL6 708 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms