RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ASCL1P50553 236 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 DRG2P55039 364 aaKnown RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 CASP9P55211 416 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 POLR2LP62875 67 aaKnown RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 SQLEQ14534 574 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 OR1C1Q15619 314 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 NKG7Q16617 165 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 C1orf220Q5T0J3 134 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 ARL6IP4Q66PJ3 421 aaKnown RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 SPINK14Q6IE38 97 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 ARMC6Q6NXE6 501 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 CNSTQ6PJW8 725 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 B3GNT6Q6ZMB0 384 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 RFLNAQ6ZTI6 216 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 CCDC65Q8IXS2 484 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 RFLNBQ8N5W9 214 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 TMEM178AQ8NBL3 297 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 RELL2Q8NC24 303 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 MDS2Q8NDY4 140 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 OR5M9Q8NGP3 310 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 TFAP2BQ92481 460 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 SMPDL3BQ92485 455 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 N4BP2L2Q92802 583 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 GCDHQ92947 438 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 SCAMP4Q969E2 229 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 AP2M1Q96CW1 435 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 COX14Q96I36 57 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 CELF6Q96J87 481 aaKnown RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 WDCPQ9H6R7 721 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 FANCLQ9NW38 375 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 VPS18Q9P253 973 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 DNAI1Q9UI46 699 aa6.29□□□□□ -1.4
HDAC3-206ENST00000471968 EIF3LQ9Y262 564 aaKnown RBP6.29□□□□□ -1.4
HDAC3-206ENST00000471968 DNAJC13O75165 2243 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 KDELR3O43731 214 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 GRAP2O75791 330 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 OR2B3O76000 313 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 PDE9AO76083 593 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 MSL3P1P0C860 447 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 BMP5P22003 454 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 VIPR1P32241 457 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 RAB28P51157 221 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 CLCNKAP51800 687 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 SNRPFP62306 86 aaKnown RBP6.28□□□□□ -1.4
HDAC3-206ENST00000471968 TMPRSS15P98073 1019 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 DPTQ07507 201 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 TUBA3CQ13748 450 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 MESDQ14696 234 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 CYTH1Q15438 398 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 INSCQ1MX18 579 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 ARTNQ5T4W7 220 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 TXNRD3NBQ6F5E7 133 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 ZNF585AQ6P3V2 769 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 ARHGAP11AQ6P4F7 1023 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 TUBA3EQ6PEY2 450 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 UNC5DQ6UXZ4 953 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 NDUFAF7Q7L592 441 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 EPM2AIP1Q7L775 607 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-206ENST00000471968 OOSP2Q86WS3 158 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 KIF18BQ86Y91 864 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 C12orf56Q8IXR9 622 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 SMYD4Q8IYR2 804 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-206ENST00000471968 CARFQ8N187 725 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 BEST3Q8N1M1 668 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 AMER2Q8N7J2 671 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 GPR150Q8NGU9 434 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 CASKIN2Q8WXE0 1202 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 ECHDC3Q96DC8 303 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 MED15Q96RN5 788 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 TUBGCP5Q96RT8 1024 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 ABCG8Q9H221 673 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 THAP9Q9H5L6 903 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 ATP13A3Q9H7F0 1226 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 CATSPERBQ9H7T0 1116 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 WDR54Q9H977 334 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 PNPLA3Q9NST1 481 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 B4GALT7Q9UBV7 327 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 SLC23A2Q9UGH3 650 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 TEKT2Q9UIF3 430 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 FAM215AQ9Y5M1 114 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 AP1M2Q9Y6Q5 423 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 CPAMD8Q8IZJ3 1885 aa6.28□□□□□ -1.4
HDAC3-206ENST00000471968 GSAPA4D1B5 854 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 OR6C74A6NCV1 312 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 A8MUI8 341 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 E5RJQ4 531 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 NPIPA2E9PIF3 369 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 NPIPA3F8WFD2 350 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 GAPDHSO14556 408 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-206ENST00000471968 MAP3K7O43318 606 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 HS6ST1O60243 411 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 RAMP2O60895 175 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 CALCAP01258 141 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 SP1P08047 785 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 COX6A1P12074 109 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 PAX1P15863 534 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 ST6GAL1P15907 406 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 TFEBP19484 476 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 ALAS2P22557 587 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 LHCGRP22888 699 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms