RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 AZGP1P25311 298 aaKnown RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OAZ1P54368 228 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SLC9B1Q4ZJI4 515 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF627Q7L945 461 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZSCAN5AQ9BUG6 496 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DUSP16Q9BY84 665 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TBL1XR1Q9BZK7 514 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GPN1Q9HCN4 374 aaPredicted RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MALT1Q9UDY8 824 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PFDN2Q9UHV9 154 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PCDHB3Q9Y5E6 796 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SNX10Q9Y5X0 201 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PMF1-BGLAPU3KQ54 211 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ITGB1P05556 798 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CREB5Q02930 508 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TMEM63BQ5T3F8 832 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 POF1BQ8WVV4 589 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZC3H10Q96K80 434 aaKnown RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TET3O43151 1660 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CPNE3O75131 537 aaKnown RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CBLBQ13191 982 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DCST1Q5T197 706 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RNASEH2BQ5TBB1 312 aaKnown RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SPPL2CQ8IUH8 684 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CYB5D2Q8WUJ1 264 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HSFY1Q96LI6 401 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SHOX2O60902 331 aaPredicted RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ANXA4P09525 319 aaPredicted RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HOXB8P17481 243 aaPredicted RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR3A3P47888 321 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR3A2P47893 321 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CDK10Q15131 360 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 UNC93AQ86WB7 457 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ARHGEF4Q9NR80 690 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CDK9P50750 372 aaKnown RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NAPRTQ6XQN6 538 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 AADATQ8N5Z0 425 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZFP3Q96NJ6 502 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PNPOQ9NVS9 261 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR5H15A6NDH6 313 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR5H14A6NHG9 310 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR5H1A6NKK0 313 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 IRF2P14316 349 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PRLRP16471 622 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DPYSQ14117 519 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 AARDQ4LEZ3 155 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MTERF1Q99551 399 aaKnown RBP13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 IRF2BPLQ9H1B7 796 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CA5BQ9Y2D0 317 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DHFRP00374 187 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PBX3P40426 434 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ELP6Q0PNE2 266 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 INAVAQ3KP66 663 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ABCB8Q9NUT2 735 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KCTD5Q9NXV2 234 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RIC1Q4ADV7 1423 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SNAP91O60641 907 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 STOMP27105 288 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GARNL3Q5VVW2 1013 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MAP4K3Q8IVH8 894 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DLG3Q92796 817 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ADAP2Q9NPF8 381 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MYH2Q9UKX2 1941 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FRMPD4Q14CM0 1322 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 LOXHD1Q8IVV2 1947 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PRMT5O14744 637 aaPredicted RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PSMG1O95456 288 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ADRB2P07550 413 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KIR3DL1P43629 444 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ARCN1P48444 511 aaKnown RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 LACTB2Q53H82 288 aaPredicted RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ESCO2Q56NI9 601 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SYVN1Q86TM6 617 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KCNJ9Q92806 393 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HPS1Q92902 700 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DIRAS2Q96HU8 199 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PIWIL1Q96J94 861 aaKnown RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PADI3Q9ULW8 664 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FAM155BO75949 473 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ERBB2P04626 1255 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CFL1P23528 166 aaKnown RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SPAM1P38567 509 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GPR68Q15743 365 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF709Q8N972 641 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TSTD1Q8NFU3 115 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 EPYCQ99645 322 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TESMINQ9Y4I5 508 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PEX12O00623 359 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HSPA12AO43301 675 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 LDB2O43679 373 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CDKN1CP49918 316 aaPredicted RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 INTS6LQ5JSJ4 861 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms