RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 RDH14Q9HBH5 336 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 PDP2Q9P2J9 529 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 DKK4Q9UBT3 224 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 FBXO5Q9UKT4 447 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 CHMP2BQ9UQN3 213 aa14.93□□□□□ -0.02
SDC3-203ENST00000471567 CFAP20Q9Y6A4 193 aaKnown RBP14.93□□□□□ -0.02
SDC3-203ENST00000471567 CCDC187A0A096LP49 1063 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 PRAMEF33A0A0G2JMD5 474 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 TMEM8BA6NDV4 472 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 IQCF5A8MTL0 148 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 GPC4O75487 556 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 UBXN7O94888 489 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 PROS1P07225 676 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 PKMP14618 531 aaKnown RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 ITGB6P18564 788 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 AOAHP28039 575 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 FMO4P31512 558 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 CSF2RBP32927 897 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 SLC1A2P43004 574 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 LSSP48449 732 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 PPM1FP49593 454 aaPredicted RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 CFHR1Q03591 330 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 CTBP1Q13363 440 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 BOP1Q14137 746 aaKnown RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 KRT33BQ14525 404 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 TMED2Q15363 201 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 GLE1Q53GS7 698 aaKnown RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 HSP90AA5PQ58FG0 334 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 CTSL3PQ5NE16 218 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 UNC5AQ6ZN44 842 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 ZNF574Q6ZN55 896 aaPredicted RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 TMPRSS9Q7Z410 1059 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 B3GNT8Q7Z7M8 397 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 PLXDC1Q8IUK5 500 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 DENND6AQ8IWF6 608 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 LSMEM2Q8N112 164 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 CEP112Q8N8E3 955 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 WDR36Q8NI36 951 aaKnown RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 LKAAEAR1Q8TD35 194 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 SEC14L1Q92503 715 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 TFGQ92734 400 aaPredicted RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 CERS2Q96G23 380 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 WDR83Q9BRX9 315 aaKnown RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 FOXP3Q9BZS1 431 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 SEMA6CQ9H3T2 930 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 KIR3DX1Q9H7L2 352 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 POLR1BQ9H9Y6 1135 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 PLAC1Q9HBJ0 212 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 LATS2Q9NRM7 1088 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 IARS2Q9NSE4 1012 aaKnown RBP14.92□□□□□ -0.02
SDC3-203ENST00000471567 CRYL1Q9Y2S2 319 aa14.92□□□□□ -0.02
SDC3-203ENST00000471567 SPEGQ15772 3267 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 IGHV5-10-1A0A0J9YXX1 117 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 C1QTNF9BB2RNN3 333 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 BHMG1C9JSJ3 638 aaPredicted RBP14.91□□□□□ -0.02
SDC3-203ENST00000471567 SLCO2B1O94956 709 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 C1QTNF9P0C862 333 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 ERVK-10P10266 1014 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 HOXB3P14651 431 aaPredicted RBP14.91□□□□□ -0.02
SDC3-203ENST00000471567 AMD1P17707 334 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 ACADLP28330 430 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 MAPK9P45984 424 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 LEPRP48357 1165 aaKnown RBP14.91□□□□□ -0.02
SDC3-203ENST00000471567 PLTPP55058 493 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 BRD3Q15059 726 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 ZNF789Q5FWF6 425 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 HP1BP3Q5SSJ5 553 aaPredicted RBP14.91□□□□□ -0.02
SDC3-203ENST00000471567 PLEKHS1Q5SXH7 462 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 KLHL35Q6PF15 583 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 KIAA0408Q6ZU52 694 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 CNTN4Q8IWV2 1026 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 SLC22A15Q8IZD6 547 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 UNC5BQ8IZJ1 945 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 KRT222Q8N1A0 295 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 C2CD4AQ8NCU7 369 aaPredicted RBP14.91□□□□□ -0.02
SDC3-203ENST00000471567 FBXO36Q8NEA4 188 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 ACVR1CQ8NER5 493 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 NCSTNQ92542 709 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 CFAP36Q96G28 342 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 FERD3LQ96RJ6 166 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 RAB33BQ9H082 229 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 OGFRQ9NZT2 677 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 AKAP7Q9P0M2 348 aaPredicted RBP14.91□□□□□ -0.02
SDC3-203ENST00000471567 EPHA6Q9UF33 1036 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 SLC24A2Q9UI40 661 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 CDYLQ9Y232 598 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 PCDHGA8Q9Y5G5 932 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 COMMD10Q9Y6G5 202 aa14.91□□□□□ -0.02
SDC3-203ENST00000471567 HGSO14964 777 aaPredicted RBP14.9□□□□□ -0.02
SDC3-203ENST00000471567 CAPNS1P04632 268 aa14.9□□□□□ -0.02
SDC3-203ENST00000471567 THRAP10827 490 aa14.9□□□□□ -0.02
SDC3-203ENST00000471567 MLLT3P42568 568 aaPredicted RBP14.9□□□□□ -0.02
SDC3-203ENST00000471567 SLC7A5Q01650 507 aa14.9□□□□□ -0.02
SDC3-203ENST00000471567 HSPA14Q0VDF9 509 aa14.9□□□□□ -0.02
SDC3-203ENST00000471567 PLCL1Q15111 1095 aa14.9□□□□□ -0.02
SDC3-203ENST00000471567 PHF19Q5T6S3 580 aa14.9□□□□□ -0.02
SDC3-203ENST00000471567 DUS1LQ6P1R4 473 aaKnown RBP14.9□□□□□ -0.02
SDC3-203ENST00000471567 IGF2-ASQ6U949 168 aa14.9□□□□□ -0.02
SDC3-203ENST00000471567 ZDHHC24Q6UX98 284 aa14.9□□□□□ -0.02
SDC3-203ENST00000471567 NAPRTQ6XQN6 538 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms