RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 REV3LO60673 3130 aa9.2□□□□□ -0.94
VPS52-216ENST00000471309 BRWD1Q9NSI6 2320 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 C17orf113A0A1B0GUU1 675 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 KLHL33A6NCF5 533 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 PABPN1LA6NDY0 278 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 CHURC1-FNTBB4DL54 471 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 AZIN1O14977 448 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 HNRNPCL1O60812 293 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 PSIP1O75475 530 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 ATP5HO75947 161 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 UNC5CO95185 931 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 MATN4O95460 622 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 JUNP05412 331 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 ANXA5P08758 320 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 CHRNB1P11230 501 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 ACADMP11310 421 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 MYCLP1P12525 358 aaPredicted RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 ZNF8P17098 575 aaPredicted RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 GABRG2P18507 467 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 TRIM23P36406 574 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 SCTRP47872 440 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 PIK3CGP48736 1102 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 AGTR2P50052 363 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 HNMTP50135 292 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 DGKEP52429 567 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 PKNOX1P55347 436 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 CORO7P57737 925 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 SH3BP2P78314 561 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 CDC16Q13042 620 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 SGCGQ13326 291 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 FGL2Q14314 439 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 LRRC32Q14392 662 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 KRT72Q14CN4 511 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 PDCD2Q16342 344 aaPredicted RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 SLC9B1Q4ZJI4 515 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 KIAA1324Q6UXG2 1013 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 ACAD11Q709F0 780 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 TRIM69Q86WT6 500 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 ZNF547Q8IVP9 402 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 CHCHD4Q8N4Q1 142 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 OXR1Q8N573 874 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 OR56A4Q8NGH8 313 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 OR2L2Q8NH16 312 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 HM13Q8TCT9 377 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 TRPC4APQ8TEL6 797 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 SKA2Q8WVK7 121 aaPredicted RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 DLG3Q92796 817 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 PRR11Q96HE9 360 aaPredicted RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 NSUN5Q96P11 429 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 ZNF382Q96SR6 550 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 EGFL8Q99944 293 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 TMEM79Q9BSE2 394 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 NUSAP1Q9BXS6 441 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 TRIM54Q9BYV2 358 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 NUF2Q9BZD4 464 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 MEAF6Q9HAF1 191 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 PARVBQ9HBI1 364 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 ZBTB26Q9HCK0 441 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 TNFRSF12AQ9NP84 129 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 POLMQ9NP87 494 aaPredicted RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 SEMA4BQ9NPR2 832 aaPredicted RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 TCF7L2Q9NQB0 619 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 MBNL1Q9NR56 388 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 ARHGEF3Q9NR81 526 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 PHPT1Q9NRX4 125 aaPredicted RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 ARL15Q9NXU5 204 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 WWOXQ9NZC7 414 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 GULP1Q9UBP9 304 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 NDRG2Q9UN36 371 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 TRIM33Q9UPN9 1127 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 PDE10AQ9Y233 779 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 MRPS17Q9Y2R5 130 aaKnown RBP9.19□□□□□ -0.94
VPS52-216ENST00000471309 TRAF6Q9Y4K3 522 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 ASB1Q9Y576 335 aa9.19□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3DA0A087WVF3 549 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3IA0A087WXS9 549 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3EA0A087X179 549 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3KA0A087X1G2 549 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3FA6NER0 549 aaPredicted RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 MGAT4DA6NG13 374 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 C10orf142B7Z368 130 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3LB9A6J9 549 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 SDHDO14521 159 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 GIPC1O14908 333 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TAPBPO15533 448 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 FSBPO95073 299 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 ESRRBO95718 433 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 GUCA1CO95843 209 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 PAK4O96013 591 aaPredicted RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 IGLV3-19P01714 112 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 HIST1H2AGP0C0S8 130 aaPredicted RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3HP0C7X1 549 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TSPAN8P19075 237 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 HIST1H2ADP20671 130 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 CD72P21854 359 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 PBLDP30039 288 aaPredicted RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 IGFALSP35858 605 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 GGT5P36269 586 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 PREPP48147 710 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 RPIAP49247 311 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms