RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 APMAPQ9HDC9 416 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 PACSIN2Q9UNF0 486 aaPredicted RBP13.2□□□□□ -0.3
HMGN1-211ENST00000471260 KCTD3Q9Y597 815 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 COLEC10Q9Y6Z7 277 aa13.2□□□□□ -0.3
HMGN1-211ENST00000471260 ERI2A8K979 691 aaKnown RBP13.19□□□□□ -0.3
HMGN1-211ENST00000471260 ZNF891A8MT65 544 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-211ENST00000471260 GOLGA8KD6RF30 607 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 METTL18O95568 372 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 AP2A1O95782 977 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 FTCDO95954 541 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 GSTM1P09488 218 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 FGF5P12034 268 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 PLA2G2AP14555 144 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 NELFEP18615 380 aaKnown RBP13.19□□□□□ -0.3
HMGN1-211ENST00000471260 NDUFS1P28331 727 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 LEPRP48357 1165 aaKnown RBP13.19□□□□□ -0.3
HMGN1-211ENST00000471260 PRLHRP49683 370 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 SEPHS1P49903 392 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 MC1RQ01726 317 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 GSTM4Q03013 218 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 FOXM1Q08050 763 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 C2orf54Q08AI8 447 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 TBR1Q16650 682 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 CRTC2Q53ET0 693 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-211ENST00000471260 FAM83HQ6ZRV2 1179 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-211ENST00000471260 DET1Q7L5Y6 550 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 LINC00523Q86TU6 105 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 KMT5CQ86Y97 462 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 IFT20Q8IY31 132 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 CARFQ8N187 725 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 MREGQ8N565 214 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 FAM71DQ8N9W8 422 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 OR13C4Q8NGS5 318 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 STYXQ8WUJ0 223 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 PBKQ96KB5 322 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 FCRL4Q96PJ5 515 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 TMEM121Q9BTD3 319 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 VPS37BQ9H9H4 285 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 GPN2Q9H9Y4 310 aaPredicted RBP13.19□□□□□ -0.3
HMGN1-211ENST00000471260 ZDHHC3Q9NYG2 299 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 PSMD13Q9UNM6 376 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 HEBP2Q9Y5Z4 205 aa13.19□□□□□ -0.3
HMGN1-211ENST00000471260 IGLV3-16A0A075B6K0 115 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 TRBV5-4A0A0C4DH59 114 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 SGTAO43765 313 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 SLC35G4P0C7Q5 338 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 PSMA3P25788 255 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 MC4RP32245 332 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 LMAN1P49257 510 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 LAMB3Q13751 1172 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 SPARCL1Q14515 664 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 PLCL1Q15111 1095 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 ZSCAN26Q16670 478 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 MEI1Q5TIA1 1274 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 CAPRIN2Q6IMN6 1127 aaKnown RBP13.18□□□□□ -0.3
HMGN1-211ENST00000471260 IRGCQ6NXR0 463 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 BORAQ6PGQ7 559 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 TIPARPQ7Z3E1 657 aaKnown RBP13.18□□□□□ -0.3
HMGN1-211ENST00000471260 PPP1R3BQ86XI6 285 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 EXD3Q8N9H8 876 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 GPR150Q8NGU9 434 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 HM13Q8TCT9 377 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 SLC41A2Q96JW4 573 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 C12orf66Q96MD2 445 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 OR6C1Q96RD1 312 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-211ENST00000471260 SH3GL2Q99962 352 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 ULBP3Q9BZM4 244 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 WWP1Q9H0M0 922 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 ADNPQ9H2P0 1102 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 KIR3DX1Q9H7L2 352 aa13.18□□□□□ -0.3
HMGN1-211ENST00000471260 IMP3Q9NV31 184 aaKnown RBP13.18□□□□□ -0.3
HMGN1-211ENST00000471260 NLE1Q9NVX2 485 aaPredicted RBP13.18□□□□□ -0.3
HMGN1-211ENST00000471260 LOC101059948A0A1B0GTJ6 334 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 OR5K3A6NET4 321 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 ERICH4A6NGS2 130 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 MATN2O00339 956 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 QSOX1O00391 747 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 KIF1CO43896 1103 aaKnown RBP13.17□□□□□ -0.3
HMGN1-211ENST00000471260 SHOX2O60902 331 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-211ENST00000471260 GAS8O95995 478 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 MT-ND3P03897 115 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 ACRV1P26436 265 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 PBLDP30039 288 aaPredicted RBP13.17□□□□□ -0.3
HMGN1-211ENST00000471260 STAT5AP42229 794 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 CD151P48509 253 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 GDF10P55107 478 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 TMPRSS15P98073 1019 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 ACY1Q03154 408 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 CACNG1Q06432 222 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 SKIDA1Q1XH10 827 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.17□□□□□ -0.3
HMGN1-211ENST00000471260 ZNF449Q6P9G9 518 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 FAM92BQ6ZTR7 304 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 OOSP2Q86WS3 158 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 RASGRP3Q8IV61 690 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 CFAP206Q8IYR0 622 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
HMGN1-211ENST00000471260 DNAJC1Q96KC8 554 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms