RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 SPINT1O43278 529 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SH3BP5O60239 455 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 HNRNPCL1O60812 293 aaKnown RBP9□□□□□ -0.97
PTPRE-207ENST00000471218 C8GP07360 202 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SBK3P0C264 359 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 FTH1P19P0C7X4 201 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 ATP1B2P14415 290 aaPredicted RBP9□□□□□ -0.97
PTPRE-207ENST00000471218 CHRM3P20309 590 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SAT1P21673 171 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 NUDT1P36639 197 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 ABCG1P45844 678 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SLC1A6P48664 564 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 HERVK_113P63132 956 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 CDKL1Q00532 357 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 DMTNQ08495 405 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 DLG1Q12959 904 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 CDC16Q13042 620 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SETDB1Q15047 1291 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 TEAD4Q15561 434 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 TBCCQ15814 346 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SETMARQ53H47 684 aaPredicted RBP9□□□□□ -0.97
PTPRE-207ENST00000471218 AGBL4Q5VU57 503 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 C16orf46Q6P387 395 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 PAQR3Q6TCH7 311 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 Q6ZVL8 140 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 LDB1Q86U70 411 aaPredicted RBP9□□□□□ -0.97
PTPRE-207ENST00000471218 MYO1HQ8N1T3 1032 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 ZBTB2Q8N680 514 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 DENND6BQ8NEG7 585 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SKA1Q96BD8 255 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 AP2M1Q96CW1 435 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 NUS1Q96E22 293 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 MRGPRX1Q96LB2 322 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 LINC00615Q96LM1 132 aaPredicted RBP9□□□□□ -0.97
PTPRE-207ENST00000471218 ATOH8Q96SQ7 321 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 CCT7Q99832 543 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 ELAC2Q9BQ52 826 aaKnown RBP9□□□□□ -0.97
PTPRE-207ENST00000471218 TUBB6Q9BUF5 446 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 SPATA16Q9BXB7 569 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 ERVK-6Q9BXR3 956 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 ILKAPQ9H0C8 392 aaPredicted RBP9□□□□□ -0.97
PTPRE-207ENST00000471218 SLCO1B3Q9NPD5 702 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 ITM2CQ9NQX7 267 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 NUDT4Q9NZJ9 180 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 CYP8B1Q9UNU6 501 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 GPR34Q9UPC5 381 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 RAP2CQ9Y3L5 183 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 MYOFQ9NZM1 2061 aa9□□□□□ -0.97
PTPRE-207ENST00000471218 ANKRD36A6QL64 1941 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 SCN8AQ9UQD0 1980 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 CKAP5Q14008 2032 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 C17orf113A0A1B0GUU1 675 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 A8MT66 165 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 NEMP1O14524 444 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 BCAT2O15382 392 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 OR1I1O60431 355 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 DLX3O60479 287 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 KCNJ13O60928 360 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 DNAJC6O75061 913 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 RECQL5O94762 991 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 KIAA0754O94854 1291 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 MLYCDO95822 493 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 IGLV3-19P01714 112 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 DNTTP04053 509 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 HOXC4P09017 264 aaPredicted RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 MPC1LP0DKB6 136 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 C6P13671 934 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 HLA-EP13747 358 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 PCSK2P16519 638 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 VCLP18206 1134 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 NDUFV2P19404 249 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 MSH3P20585 1137 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 IMPDH1P20839 514 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 AOAHP28039 575 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 DRD3P35462 400 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 ETV3P41162 512 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 PSMD8P48556 350 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 PIK3CGP48736 1102 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 PRLHRP49683 370 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 ALDH18A1P54886 795 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 AP1S2P56377 157 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 RPS14P62263 151 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 RPS21P63220 83 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 CNTN1Q12860 1018 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 ACOX1Q15067 660 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 SMAD1Q15797 465 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 GLIPR1L2Q4G1C9 344 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 CFAP157Q5JU67 520 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 SH2D4BQ5SQS7 431 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 METTL21CQ5VZV1 264 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 TMEM207Q6UWW9 146 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 KIAA1324Q6UXG2 1013 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 FRMD7Q6ZUT3 714 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 FAM47EQ6ZV65 393 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 TMPRSS7Q7RTY8 843 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 EFL1Q7Z2Z2 1120 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 PIM3Q86V86 326 aa8.99□□□□□ -0.97
PTPRE-207ENST00000471218 MMAAQ8IVH4 418 aaKnown RBP8.99□□□□□ -0.97
PTPRE-207ENST00000471218 TCAIMQ8N3R3 496 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms