RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 TRPC4APQ8TEL6 797 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 SKA2Q8WVK7 121 aaPredicted RBP10.78□□□□□ -0.68
SND1-208ENST00000470463 RHBDF1Q96CC6 855 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 C19orf60Q96EN9 201 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 ACOX2Q99424 681 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 CD244Q9BZW8 370 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 KCNK12Q9HB15 430 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 PREBQ9HCU5 417 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 ARL15Q9NXU5 204 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 HCN2Q9UL51 889 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 ITM2BQ9Y287 266 aa10.78□□□□□ -0.68
SND1-208ENST00000470463 SLC5A10A0PJK1 596 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 C2CD4DB7Z1M9 353 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 ANKRD65E5RJM6 399 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 E9PBE3 544 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 K7EPI3 171 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SDHDO14521 159 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 UBDO15205 165 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 MBTPS2O43462 519 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 PLRG1O43660 514 aaKnown RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 KLHL41O60662 606 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 PSIP1O75475 530 aaKnown RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 STK16O75716 305 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 WDR47O94967 919 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 PCDH8O95206 1070 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SIX3O95343 332 aaPredicted RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 EBLN1P0CF75 366 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 HOXB2P14652 356 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 EPB42P16452 691 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 EPHA3P29320 983 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SOX9P48436 509 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 HK3P52790 923 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 CDH13P55290 713 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 STX1BP61266 288 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 RPS14P62263 151 aaKnown RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 BTKQ06187 659 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 ZNF33BQ06732 778 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 GRIK2Q13002 908 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 GTF2H2Q13888 395 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SQLEQ14534 574 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SPRED3Q2MJR0 410 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SMU1Q2TAY7 513 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 VWA5B1Q5TIE3 1220 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 NAIF1Q69YI7 327 aaPredicted RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 GTF2H2CQ6P1K8 395 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 PNCKQ6P2M8 343 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 TMEM220Q6QAJ8 160 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 CHSY3Q70JA7 882 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 DET1Q7L5Y6 550 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SPATA19Q7Z5L4 167 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 PARP9Q8IXQ6 854 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SLC22A15Q8IZD6 547 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 TEX9Q8N6V9 391 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 RASGEF1AQ8N9B8 481 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 IL17RCQ8NAC3 791 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 PHC3Q8NDX5 983 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 HM13Q8TCT9 377 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 MAPK15Q8TD08 544 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 TWIST2Q8WVJ9 160 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 ATP6V1E2Q96A05 226 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 MCUR1Q96AQ8 359 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SLC7A6OSQ96CW6 309 aaPredicted RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 NTMT1Q9BV86 223 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 DPEP2Q9H4A9 486 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SLC32A1Q9H598 525 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 UBE2ZQ9H832 354 aaPredicted RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 RMI1Q9H9A7 625 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 SEMA4BQ9NPR2 832 aaPredicted RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 SLC2A4RGQ9NR83 387 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 ARL8BQ9NVJ2 186 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 UTP6Q9NYH9 597 aaKnown RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 ARMCX1Q9P291 453 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 MTF2Q9Y483 593 aaPredicted RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 DNAJC15Q9Y5T4 150 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 PLXNB3Q9ULL4 1909 aa10.77□□□□□ -0.69
SND1-208ENST00000470463 PRRC2BQ5JSZ5 2229 aaKnown RBP10.77□□□□□ -0.69
SND1-208ENST00000470463 CKAP5Q14008 2032 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 OR2AG2A6NM03 316 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 PRR5-ARHGAP8B1AHC4 643 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 UBFD1O14562 309 aaKnown RBP10.76□□□□□ -0.69
SND1-208ENST00000470463 DCXO43602 365 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 SGTAO43765 313 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 RNASEH2AO75792 299 aaKnown RBP10.76□□□□□ -0.69
SND1-208ENST00000470463 MATN4O95460 622 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 KLF8O95600 359 aaPredicted RBP10.76□□□□□ -0.69
SND1-208ENST00000470463 SOD1P00441 154 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 RPN2P04844 631 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 ACADMP11310 421 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 CCR10P46092 362 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 ACADVLP49748 655 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 CCNG1P51959 295 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 SEC13P55735 322 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 MXRA7P84157 204 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 ARHGAP8P85298 464 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 STX5Q13190 355 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 RIPK1Q13546 671 aa10.76□□□□□ -0.69
SND1-208ENST00000470463 CYLC2Q14093 348 aaPredicted RBP10.76□□□□□ -0.69
SND1-208ENST00000470463 PON2Q15165 354 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms