RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GPR39O43194 453 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 ABCB7O75027 752 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 MATN1P21941 496 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 CRHBPP24387 322 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 MTHFRP42898 656 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 RAB15P59190 212 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 MAD2L1Q13257 205 aaPredicted RBP13.41□□□□□ -0.26
BRCA1-209ENST00000470026 BROXQ5VW32 411 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 TTC23Q5W5X9 447 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 RGMBQ6NW40 437 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 HOMEZQ8IX15 550 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 FAM86B1Q8N7N1 296 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 OR2T12Q8NG77 320 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 SLC22A17Q8WUG5 538 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 HDAC2Q92769 488 aaKnown RBP13.41□□□□□ -0.26
BRCA1-209ENST00000470026 NSUN3Q9H649 340 aaKnown RBP13.41□□□□□ -0.26
BRCA1-209ENST00000470026 DNAAF2Q9NVR5 837 aaKnown RBP13.41□□□□□ -0.26
BRCA1-209ENST00000470026 SLC25A37Q9NYZ2 338 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 LMCD1Q9NZU5 365 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 DNMT3BQ9UBC3 853 aaKnown RBP13.41□□□□□ -0.26
BRCA1-209ENST00000470026 SLC30A1Q9Y6M5 507 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 SCN8AQ9UQD0 1980 aa13.41□□□□□ -0.26
BRCA1-209ENST00000470026 hCG_2014768A0A024R1R8 64 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 TRBV5-4A0A0C4DH59 114 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 A0A0U1RQS6 177 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 RGS14O43566 566 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 S100BP04271 92 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF7P17097 686 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 IL1RNP18510 177 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CD247P20963 164 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 NRIP1P48552 1158 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 PRKCZQ05513 592 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 NFATC3Q12968 1075 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 RUNDC3AQ59EK9 446 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 GTF2IRD2BQ6EKJ0 949 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 SLC8B1Q6J4K2 584 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 DUS1LQ6P1R4 473 aaKnown RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CHST15Q7LFX5 561 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 GTF2IRD2Q86UP8 949 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 STK32CQ86UX6 486 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 ZDHHC13Q8IUH4 622 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 SVOPLQ8N434 492 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 PIH1D2Q8WWB5 315 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 BORCS5Q969J3 196 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 ACDQ96AP0 544 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 THAP11Q96EK4 314 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 MBOAT4Q96T53 435 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 HBEGFQ99075 208 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 NTMT1Q9BV86 223 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 GPN2Q9H9Y4 310 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 HPS4Q9NQG7 708 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 EIF3LQ9Y262 564 aaKnown RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 OR51B4Q9Y5P0 310 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 MAGED1Q9Y5V3 778 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CA12O43570 354 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 ARHGEF15O94989 841 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 SCELO95171 688 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 IL6P05231 212 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 SLC2A4P14672 509 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 HMGA1P17096 107 aaKnown RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 GSTM2P28161 218 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 AKT1P31749 480 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CA5AP35218 305 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 HSPA7P48741 367 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CYP4F3Q08477 520 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 C16orf72Q14CZ0 275 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 SKIV2LQ15477 1246 aaKnown RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 NEDD8Q15843 81 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 ZIK1Q3SY52 487 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 HABP4Q5JVS0 413 aaKnown RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 TAS1R1Q7RTX1 841 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 ABI1Q8IZP0 508 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 SMYD1Q8NB12 490 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 LKAAEAR1Q8TD35 194 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 USP7Q93009 1102 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 ZBTB18Q99592 522 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 TMEM175Q9BSA9 504 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 C17orf80Q9BSJ5 609 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 TTPALQ9BTX7 342 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 KLF16Q9BXK1 252 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 FAM126AQ9BYI3 521 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CD244Q9BZW8 370 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CIPCQ9C0C6 399 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 TOR3AQ9H497 397 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 IKZF5Q9H5V7 419 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 CLMPQ9H6B4 373 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 RDH14Q9HBH5 336 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 FAM118AQ9NWS6 357 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 TRPS1Q9UHF7 1281 aa13.4□□□□□ -0.26
BRCA1-209ENST00000470026 TMEM88BA6NKF7 163 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 G3V2T6 193 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 ADAM12O43184 909 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 B4GAT1O43505 415 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 KATNA1O75449 491 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 EFEMP2O95967 443 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 GALTP07902 379 aa13.39□□□□□ -0.27
BRCA1-209ENST00000470026 RETP07949 1114 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms