RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 LRRC37BQ96QE4 947 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 SMIM14Q96QK8 99 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 PSKH2Q96QS6 385 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 FMO2Q99518 471 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 DPYSL5Q9BPU6 564 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 MGME1Q9BQP7 344 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 HEPHQ9BQS7 1158 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 FSD1LQ9BXM9 530 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 C12orf65Q9H3J6 166 aaKnown RBP4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 LRRC40Q9H9A6 602 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 VPS37BQ9H9H4 285 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 LMAN1LQ9HAT1 526 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 AASDHPPTQ9NRN7 309 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 ZDHHC18Q9NUE0 388 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 SYBUQ9NX95 663 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 BFARQ9NZS9 450 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 NYNRINQ9P2P1 1898 aaKnown RBP4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 THAP10Q9P2Z0 257 aaPredicted RBP4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 SUN2Q9UH99 717 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 IL36AQ9UHA7 158 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 RAB21Q9UL25 225 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 CHMP2BQ9UQN3 213 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 STON1Q9Y6Q2 735 aa4.08□□□□□ -1.76
TMEM39A-204ENST00000468545 DOCK4Q8N1I0 1966 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 EDDM13A0A1B0GTR0 161 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 KPNA3O00505 521 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 DYNC1I1O14576 645 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ALOX15BO15296 676 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 CDC14BO60729 498 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 RNASEH1O60930 286 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 NDUFS2O75306 463 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ACSL3O95573 720 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 NDST3O95803 873 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 GSRP00390 522 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ALPIP09923 528 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 DRD1P21728 446 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 C5AR1P21730 350 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 CA4P22748 312 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 CTSSP25774 331 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 TNFRSF8P28908 595 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SERPINA4P29622 427 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ECHS1P30084 290 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SSTR1P30872 391 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 NTSR1P30989 418 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ADRA1AP35348 466 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 EIF2DP41214 584 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 PSMD8P48556 350 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 AP1S1P61966 158 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 CDH17Q12864 832 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 PIN1Q13526 163 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 PTPRCAPQ14761 206 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SLMAPQ14BN4 828 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 FASTKD3Q14CZ7 662 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SLC1A5Q15758 541 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 MST1LQ2TV78 715 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 HNRNPA1L2Q32P51 320 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 C19orf54Q5BKX5 351 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 TMEM196Q5HYL7 178 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SIRPB2Q5JXA9 342 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 BEND6Q5SZJ8 279 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 UBAP2Q5T6F2 1119 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 C9orf64Q5T6V5 341 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 KCTD11Q693B1 232 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 NAPEPLDQ6IQ20 393 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 FBXO38Q6PIJ6 1188 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 FAM180AQ6UWF9 173 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 GDPD4Q6W3E5 623 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 C3orf62Q6ZUJ4 267 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 MICALCLQ6ZW33 695 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ZNF534Q76KX8 674 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 TTC7BQ86TV6 843 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 MMAAQ8IVH4 418 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 NDUFAF2Q8N183 169 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ZCCHC9Q8N567 271 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 MCUQ8NE86 351 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 PPHLN1Q8NEY8 458 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 OR2A12Q8NGT7 310 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 RPLP0P6Q8NHW5 317 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 AENQ8WTP8 325 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SNX33Q8WV41 574 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 OR8D1Q8WZ84 308 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 RUBCNQ92622 972 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ISG20Q96AZ6 181 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 STAMBPL1Q96FJ0 436 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 SERPINB12Q96P63 405 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 PPP1R2P1Q96PQ5 205 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ASB2Q96Q27 587 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 GPHA2Q96T91 129 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ADI1Q9BV57 179 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ADGRE3Q9BY15 652 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 GPR63Q9BZJ6 419 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 CDC42EP4Q9H3Q1 356 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ATP13A3Q9H7F0 1226 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 XAB2Q9HCS7 855 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 BPIFA1Q9NP55 256 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 ARFGAP3Q9NP61 516 aa4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 PPANQ9NQ55 473 aaKnown RBP4.07□□□□□ -1.76
TMEM39A-204ENST00000468545 CASS4Q9NQ75 786 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms