RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TAB3Q8N5C8 712 aaPredicted RBP18.61■□□□□ 0.57
COL7A1-207ENST00000467985 CCDC89Q8N998 374 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 EXD3Q8N9H8 876 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 ACVR1CQ8NER5 493 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 NAT14Q8WUY8 206 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 FCRL4Q96PJ5 515 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 COG4Q9H9E3 785 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 ETNK1Q9HBU6 452 aa18.61■□□□□ 0.57
COL7A1-207ENST00000467985 PIH1D1Q9NWS0 290 aaKnown RBP18.61■□□□□ 0.57
COL7A1-207ENST00000467985 IGHV5-51A0A0C4DH38 117 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 LOC101059948A0A1B0GTJ6 334 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 UBA6A0AVT1 1052 aaPredicted RBP18.6■□□□□ 0.57
COL7A1-207ENST00000467985 MATN2O00339 956 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 MT-ND3P03897 115 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 MSNP26038 577 aaKnown RBP18.6■□□□□ 0.57
COL7A1-207ENST00000467985 NSG1P42857 185 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 PPP1CAP62136 330 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 HSD11B2P80365 405 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 ACY1Q03154 408 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 ITIH4Q14624 930 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 CRTC2Q53ET0 693 aaPredicted RBP18.6■□□□□ 0.57
COL7A1-207ENST00000467985 DUS1LQ6P1R4 473 aaKnown RBP18.6■□□□□ 0.57
COL7A1-207ENST00000467985 BORAQ6PGQ7 559 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 PPP1R21Q6ZMI0 780 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 NLRP9Q7RTR0 991 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 PIANPQ8IYJ0 282 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 OR52K1Q8NGK4 314 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 C1orf54Q8WWF1 131 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL7A1-207ENST00000467985 TTC1Q99614 292 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 PAK5Q9P286 719 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 RARRES3Q9UL19 164 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 RIMKLBQ9ULI2 386 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 ZKSCAN5Q9Y2L8 839 aa18.6■□□□□ 0.57
COL7A1-207ENST00000467985 OR6C74A6NCV1 312 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 F8W8V4 182 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 CCNYL3P0C7X3 344 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 PLA2G2AP14555 144 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 PRKAA1Q13131 559 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 TUBB3Q13509 450 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 SEMA5AQ13591 1074 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 SNX1Q13596 522 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 DBN1Q16643 649 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 ZNF658BQ4V348 819 aaPredicted RBP18.59■□□□□ 0.57
COL7A1-207ENST00000467985 LYPLAL1Q5VWZ2 237 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 C4orf22Q6V702 233 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 PACS1Q6VY07 963 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 LILRA3Q8N6C8 439 aaPredicted RBP18.59■□□□□ 0.57
COL7A1-207ENST00000467985 CLDN19Q8N6F1 224 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 MAIP1Q8WWC4 291 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 STAMBPL1Q96FJ0 436 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 RANBP9Q96S59 729 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 MAP3K3Q99759 626 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 OR52A5Q9H2C5 316 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 ADNPQ9H2P0 1102 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 MVB12BQ9H7P6 319 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 LZTFL1Q9NQ48 299 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 RAB6BQ9NRW1 208 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 SMARCAL1Q9NZC9 954 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 LNPEPQ9UIQ6 1025 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 PYCARDQ9ULZ3 195 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 RPS6KL1Q9Y6S9 549 aa18.59■□□□□ 0.57
COL7A1-207ENST00000467985 SPAG6O75602 509 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 KIAA0754O94854 1291 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 ZBTB11O95625 1053 aaPredicted RBP18.58■□□□□ 0.56
COL7A1-207ENST00000467985 FTH1P02794 183 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 FAM87AP0C7U9 286 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 ADRA1DP25100 572 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 CCNG2Q16589 344 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 CCDC38Q502W7 563 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 DRICH1Q6PGQ1 229 aaPredicted RBP18.58■□□□□ 0.56
COL7A1-207ENST00000467985 UNC5BQ8IZJ1 945 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 D2HGDHQ8N465 521 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 TRIM58Q8NG06 486 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 OR8K5Q8NH50 307 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 LCN9Q8WX39 176 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 PEX13Q92968 403 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 ELMO2Q96JJ3 720 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 FERD3LQ96RJ6 166 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 SRMSQ9H3Y6 488 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 MYO18BQ8IUG5 2567 aa18.58■□□□□ 0.56
COL7A1-207ENST00000467985 CCDC162PA2VCL2 907 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 LIN7AO14910 233 aaPredicted RBP18.57■□□□□ 0.56
COL7A1-207ENST00000467985 APRTP07741 180 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 PRSS56P0CW18 603 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 FOLR1P15328 257 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 ZNF28P17035 718 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 CCR10P46092 362 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 TUBB4BP68371 445 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 PLOD1Q02809 727 aaPredicted RBP18.57■□□□□ 0.56
COL7A1-207ENST00000467985 TUBB2AQ13885 445 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 TMTC4Q5T4D3 741 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 AFTPHQ6ULP2 937 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 CERS6Q6ZMG9 384 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 GALNT6Q8NCL4 622 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 OR4E2Q8NGC2 313 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 OR13J1Q8NGT2 312 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 STARD8Q92502 1023 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 TUBB2BQ9BVA1 445 aa18.57■□□□□ 0.56
COL7A1-207ENST00000467985 TFB2MQ9H5Q4 396 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms