RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 TMEM9Q9P0T7 183 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 IL17BQ9UHF5 180 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 TCAF1Q9Y4C2 921 aa13.76□□□□□ -0.21
CCHCR1-211ENST00000467553 TRBV5-4A0A0C4DH59 114 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 GOLGA6L10A0A0M3HER8 536 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 PRR19A6NJB7 356 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 AP3B1O00203 1094 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 POLR1CO15160 346 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 SGTAO43765 313 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 PHF2O75151 1096 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 ZIC2O95409 532 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 GOT2P00505 430 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 C9P02748 559 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 FAM87AP0C7U9 286 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 WT1P19544 449 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 PSMA3P25788 255 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 CCR10P46092 362 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 SARNPP82979 210 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 DMPKQ09013 629 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 DBN1Q16643 649 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 CYP1B1Q16678 543 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 BCL7AQ4VC05 210 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 SNAP47Q5SQN1 464 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 METRNLQ641Q3 311 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 ANKS6Q68DC2 871 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 NLRP9Q7RTR0 991 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 CLDN19Q8N6F1 224 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 OR13J1Q8NGT2 312 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 OR2L2Q8NH16 312 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 OR4L1Q8NH43 312 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 CAPZA3Q96KX2 299 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 POT1Q9NUX5 634 aa13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 UBR5O95071 2799 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-211ENST00000467553 A8MU76 341 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 TERTO14746 1132 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 TYRP1P17643 537 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 AMD1P17707 334 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 TPSB2P20231 275 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 MGAT1P26572 445 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 FOXN2P32314 431 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 PRAMEP78395 509 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 CDK16Q00536 496 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 IL11RAQ14626 422 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 RPE65Q16518 533 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 FASTKD1Q53R41 847 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 LRRC8BQ6P9F7 803 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 TMEM26Q6ZUK4 368 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 ESX1Q8N693 406 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 GRK7Q8WTQ7 553 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 JPH3Q8WXH2 748 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 PMEPA1Q969W9 287 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 LINC00615Q96LM1 132 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 TTC1Q99614 292 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 NAPGQ99747 312 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 CCM2Q9BSQ5 444 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 IL22Q9GZX6 179 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 RAB33BQ9H082 229 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 GPN2Q9H9Y4 310 aaPredicted RBP13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 ANAPC5Q9UJX4 755 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 ACSL5Q9ULC5 683 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 RIMKLBQ9ULI2 386 aa13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 CFAP20Q9Y6A4 193 aaKnown RBP13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCHCR1-211ENST00000467553 PIKFYVEQ9Y2I7 2098 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 IGLV3-16A0A075B6K0 115 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 CTAGE9A4FU28 777 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 AVILO75366 819 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 STK17BO94768 372 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 UBXN7O94888 489 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 NMBRP28336 390 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 NSG1P42857 185 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 PRLHRP49683 370 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 CYP4F2P78329 520 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 KCNAB2Q13303 367 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 KCNJ11Q14654 390 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 PPP1R7Q15435 360 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 LYPLAL1Q5VWZ2 237 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 PAPD7Q5XG87 772 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 AFTPHQ6ULP2 937 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 CES3Q6UWW8 571 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 LILRA3Q8N6C8 439 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 ZDHHC12Q96GR4 267 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 C9orf72Q96LT7 481 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 C12orf66Q96MD2 445 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 INSM2Q96T92 566 aaPredicted RBP13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 DDX47Q9H0S4 455 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 SLC40A1Q9NP59 571 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 IMP3Q9NV31 184 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 SYBUQ9NX95 663 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 EPHA6Q9UF33 1036 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 KLHL3Q9UH77 587 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 SAR1BQ9Y6B6 198 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 PRSS21Q9Y6M0 314 aa13.73□□□□□ -0.21
CCHCR1-211ENST00000467553 C17orf113A0A1B0GUU1 675 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms