RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 NLE1Q9NVX2 485 aaPredicted RBP15.31■□□□□ 0.04
CHD1L-205ENST00000467213 TNPO3Q9Y5L0 923 aaKnown RBP15.31■□□□□ 0.04
CHD1L-205ENST00000467213 HS3ST4Q9Y661 456 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 IGLV3-10A0A075B6K4 115 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 CXCR6O00574 342 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 IL6P05231 212 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 AKT1P31749 480 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 ETV6P41212 452 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 FCGRTP55899 365 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 ADAM17P78536 824 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 FAM219BQ5XKK7 198 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 PAQR3Q6TCH7 311 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 SPESP1Q6UW49 350 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 TSPYL5Q86VY4 417 aaPredicted RBP15.31■□□□□ 0.04
CHD1L-205ENST00000467213 GTF2H4Q92759 462 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 MYLPFQ96A32 169 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 PDLIM5Q96HC4 596 aaKnown RBP15.31■□□□□ 0.04
CHD1L-205ENST00000467213 SERPINB11Q96P15 392 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 ZBTB18Q99592 522 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 NUDT4Q9NZJ9 180 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 UXTQ9UBK9 157 aaPredicted RBP15.31■□□□□ 0.04
CHD1L-205ENST00000467213 LIMD1Q9UGP4 676 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 PLXNA3P51805 1871 aa15.31■□□□□ 0.04
CHD1L-205ENST00000467213 ILVBLA1L0T0 632 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 ASNA1O43681 348 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 HS6ST1O60243 411 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 RHOBTB1O94844 696 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 CASP2P42575 452 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 IHHQ14623 411 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 LRIT3Q3SXY7 679 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 DALRD3Q5D0E6 543 aaKnown RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 VARS2Q5ST30 1063 aaKnown RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 GJC2Q5T442 439 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 MLIPQ5VWP3 458 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 AFTPHQ6ULP2 937 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 DSG4Q86SJ6 1040 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 ATL1Q8WXF7 558 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 ZNF486Q96H40 463 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 C17orf80Q9BSJ5 609 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 CCDC59Q9P031 241 aaKnown RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 V9GYQ6 96 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 OR2A25A4D2G3 310 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 OR51F1A6NGY5 319 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 AGAP5A6NIR3 686 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 METTL15A6NJ78 407 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 RGS10O43665 173 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 NOBOXO60393 691 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 ARHGEF15O94989 841 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 PCNAP12004 261 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 TGFBR2P37173 567 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 CLCN4P51793 760 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 CRYBB1P53674 252 aaPredicted RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 DSC2Q02487 901 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 PON2Q15165 354 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 TSNQ15631 228 aaKnown RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 ZNF404Q494X3 552 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 METTL2BQ6P1Q9 378 aaKnown RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 KDELC2Q7Z4H8 507 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 DPP9Q86TI2 863 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 FAM86B1Q8N7N1 296 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 PITX2Q99697 317 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 VAPAQ9P0L0 249 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 ERVK-18Q9QC07 812 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 NDRG4Q9ULP0 352 aaKnown RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 GREB1Q4ZG55 1949 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 FAM172BPA6NC97 362 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 PTGES3LE9PB15 166 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 TSPAN12O95859 305 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 PRDX3P30048 256 aaKnown RBP15.3■□□□□ 0.04
CHD1L-205ENST00000467213 SLC10A7Q0GE19 358 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 RAPSNQ13702 412 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 RBBP7Q16576 425 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 CPZQ66K79 652 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 KDM4DQ6B0I6 523 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 LRRC8DQ7L1W4 858 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 FIG4Q92562 907 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 SLC38A4Q969I6 547 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 SLC39A13Q96H72 371 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 CLSTN3Q9BQT9 956 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 KLQ9UEF7 1012 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 ZNF229Q9UJW7 825 aa15.3■□□□□ 0.04
CHD1L-205ENST00000467213 G6PDP11413 515 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 POLR2EP19388 210 aaKnown RBP15.29■□□□□ 0.04
CHD1L-205ENST00000467213 MASP1P48740 699 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 GZMMP51124 257 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 NEK2P51955 445 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 IFITM2Q01629 132 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 PIGFQ07326 219 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 IRF5Q13568 498 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 TOR1AIP1Q5JTV8 583 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 MCFD2Q8NI22 146 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 FAM162AQ96A26 154 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 CDKN2AIPNLQ96HQ2 116 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 PYURFQ96I23 114 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 ZYG11BQ9C0D3 744 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 OR2B2Q9GZK3 357 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.29■□□□□ 0.04
CHD1L-205ENST00000467213 POU2F3Q9UKI9 436 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 TLR6Q9Y2C9 796 aa15.29■□□□□ 0.04
CHD1L-205ENST00000467213 MAN2B2Q9Y2E5 1009 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms