RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 COPS8Q99627 209 aa12.49□□□□□ -0.41
SRM-203ENST00000465788 ARL5AQ9Y689 179 aa12.49□□□□□ -0.41
SRM-203ENST00000465788 SPTBP11277 2137 aa12.49□□□□□ -0.41
SRM-203ENST00000465788 SPTAN1Q13813 2472 aaKnown RBP12.48□□□□□ -0.41
SRM-203ENST00000465788 CCDC66A2RUB6 948 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 F5H423 210 aaPredicted RBP12.48□□□□□ -0.41
SRM-203ENST00000465788 QSOX1O00391 747 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 BUD23O43709 281 aaKnown RBP12.48□□□□□ -0.41
SRM-203ENST00000465788 TIAF1O95411 115 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 AGTP01019 485 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 HBQ1P09105 142 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 FURINP09958 794 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 GP1BBP13224 206 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 CDH3P22223 829 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 RBL1P28749 1068 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 CTNNA1P35221 906 aaKnown RBP12.48□□□□□ -0.41
SRM-203ENST00000465788 ADRA1AP35348 466 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 CD151P48509 253 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 PGDP52209 483 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 RPA4Q13156 261 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 KCNAB1Q14722 419 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 LLGL1Q15334 1064 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 IGFBP7Q16270 282 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 FAM182AQ5T1J6 154 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 ZNF517Q6ZMY9 492 aaPredicted RBP12.48□□□□□ -0.41
SRM-203ENST00000465788 DET1Q7L5Y6 550 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 SNX20Q7Z614 316 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 NXPE1Q8N323 547 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 MR1Q95460 341 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 C17orf62Q9BQA9 187 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 DPH2Q9BQC3 489 aaPredicted RBP12.48□□□□□ -0.41
SRM-203ENST00000465788 SLC25A23Q9BV35 468 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 SRMSQ9H3Y6 488 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 MVB12BQ9H7P6 319 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 ARNT2Q9HBZ2 717 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 ACSS2Q9NR19 701 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 FKBPLQ9UIM3 349 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 POMT2Q9UKY4 750 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 PCDHA13Q9Y5I0 950 aa12.48□□□□□ -0.41
SRM-203ENST00000465788 CFAP20Q9Y6A4 193 aaKnown RBP12.48□□□□□ -0.41
SRM-203ENST00000465788 MED13Q9UHV7 2174 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 MACROD2A1Z1Q3 448 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 PJA2O43164 708 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 GPR39O43194 453 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 KLHL41O60662 606 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 VPS4BO75351 444 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 TJP3O95049 919 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 RBP3P10745 1247 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 ATP1B2P14415 290 aaPredicted RBP12.47□□□□□ -0.41
SRM-203ENST00000465788 KPNA2P52292 529 aaKnown RBP12.47□□□□□ -0.41
SRM-203ENST00000465788 EIF3EP60228 445 aaKnown RBP12.47□□□□□ -0.41
SRM-203ENST00000465788 XIAPP98170 497 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 ANKRD20A2Q5SQ80 823 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 ANKRD20A1Q5TYW2 823 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 DARS2Q6PI48 645 aaKnown RBP12.47□□□□□ -0.41
SRM-203ENST00000465788 CFAP206Q8IYR0 622 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 GALNT11Q8NCW6 608 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 ACTL9Q8TC94 416 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 LCN9Q8WX39 176 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 RMDN2Q96LZ7 410 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 SPATA13Q96N96 652 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 HEMGNQ9BXL5 484 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 NLNQ9BYT8 704 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 OSBPL8Q9BZF1 889 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 ZDHHC3Q9NYG2 299 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 SERTAD3Q9UJW9 196 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 VPS4AQ9UN37 437 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 ZNF451Q9Y4E5 1061 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 PCDHA3Q9Y5H8 950 aa12.47□□□□□ -0.41
SRM-203ENST00000465788 USP9YO00507 2555 aaPredicted RBP12.47□□□□□ -0.41
SRM-203ENST00000465788 ESPL1Q14674 2120 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 F8W8V4 182 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 H7C0S8 307 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 MEN1O00255 615 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 KCNN4O15554 427 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 KDM1AO60341 852 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 POLBP06746 335 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 CD63P08962 238 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 POLR2CP19387 275 aaPredicted RBP12.46□□□□□ -0.41
SRM-203ENST00000465788 CYP2A7P20853 494 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 PSMB4P28070 264 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 ZNF140P52738 457 aaPredicted RBP12.46□□□□□ -0.41
SRM-203ENST00000465788 RRADP55042 308 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 RWDD2BP57060 319 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 OTUD4Q01804 1114 aaKnown RBP12.46□□□□□ -0.41
SRM-203ENST00000465788 GPR19Q15760 415 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 PAPD7Q5XG87 772 aaKnown RBP12.46□□□□□ -0.41
SRM-203ENST00000465788 DUS1LQ6P1R4 473 aaKnown RBP12.46□□□□□ -0.41
SRM-203ENST00000465788 HOOK3Q86VS8 718 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 DSELQ8IZU8 1212 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 TMEM102Q8N9M5 508 aaPredicted RBP12.46□□□□□ -0.41
SRM-203ENST00000465788 TC2NQ8N9U0 490 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
SRM-203ENST00000465788 OR4E2Q8NGC2 313 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.46□□□□□ -0.411e-14■■■■■ 125.5
SRM-203ENST00000465788 CLIP3Q96DZ5 547 aa12.46□□□□□ -0.41
SRM-203ENST00000465788 IP6K3Q96PC2 410 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms