RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 RGS4P49798 205 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 MNX1P50219 401 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 CCT8P50990 548 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 RPL38P63173 70 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 TMC8Q8IU68 726 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 OR2AP1Q8NGE2 309 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 ZFP28Q8NHY6 868 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 ZFAND2BQ8WV99 257 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 SEPHS2Q99611 448 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 CCT7Q99832 543 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 LRRC3Q9BY71 257 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 RBM38Q9H0Z9 239 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 ATP13A3Q9H7F0 1226 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 CAAP1Q9H8G2 361 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 PFDN4Q9NQP4 134 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 WWOXQ9NZC7 414 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 CDH23Q9H251 3354 aa18.36■□□□□ 0.53
TSPAN4-210ENST00000464987 PTPRSQ13332 1948 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 ACOX3O15254 700 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 SOCS5O75159 536 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 IGSF6O95976 241 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 LRRC66Q68CR7 880 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 HTR3DQ70Z44 454 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 ITIH5Q86UX2 942 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 NXPE1Q8N323 547 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 TRPV3Q8NET8 790 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 TFAP2CQ92754 450 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 ANKRD60Q9BZ19 345 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 CD244Q9BZW8 370 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 SMOXQ9NWM0 555 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 KIAA1522Q9P206 1035 aaPredicted RBP18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 SLC2A4P14672 509 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 LHCGRP22888 699 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 HLA-FP30511 346 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 B4GALNT1Q00973 533 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 SLC44A4Q53GD3 710 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 SGO1Q5FBB7 561 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 HID1Q8IV36 788 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 FAM47BQ8NA70 645 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 MYLIPQ8WY64 445 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 MRPS31Q92665 395 aaKnown RBP18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 ZFP14Q9HCL3 533 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 LATS2Q9NRM7 1088 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 KLQ9UEF7 1012 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 CCL26Q9Y258 94 aa18.35■□□□□ 0.53
TSPAN4-210ENST00000464987 HELZP42694 1942 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 CLIC3O95833 236 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 ENO2P09104 434 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 ITGB8P26012 769 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 GGT5P36269 586 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 EEFSECP57772 596 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 PTSQ03393 145 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 KIAA0040Q15053 153 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 ATP13A5Q4VNC0 1218 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 MPPE1Q53F39 396 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 INTS11Q5TA45 600 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 KRT80Q6KB66 452 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 MACC1Q6ZN28 852 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 DPP10Q8N608 796 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 BIRC7Q96CA5 298 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 DGCR14Q96DF8 476 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 MTFMTQ96DP5 389 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 HTATIP2Q9BUP3 242 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 HECAQ9UBI9 543 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 OPTCQ9UBM4 332 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 ATP11BQ9Y2G3 1177 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 ANGPTL3Q9Y5C1 460 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 NUP214P35658 2090 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 KRT87PA6NCN2 255 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 CCDC160A6NGH7 325 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 LOC730098B7Z3J9 87 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 LEFTY2O00292 366 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 LILRB3O75022 631 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 PARNO95453 639 aaKnown RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 H6PDO95479 791 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 GPIP06744 558 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 SERPINA4P29622 427 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 CSNK1DP48730 415 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 VEGFBP49765 207 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 ATP6AP1Q15904 470 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 ZXDCQ2QGD7 858 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 AP1ARQ63HQ0 302 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 CPXM2Q8N436 756 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 TSPAN14Q8NG11 270 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 CENPNQ96H22 339 aaPredicted RBP18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 VAPAQ9P0L0 249 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 TBX21Q9UL17 535 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 COMMD3-BMI1R4GMX3 469 aa18.34■□□□□ 0.53
TSPAN4-210ENST00000464987 C5orf42Q9H799 3197 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 MYO7AQ13402 2215 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 RNF103-CHMP3A0A140T963 221 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 H3BNH8 94 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 HTR1EP28566 365 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 RFC2P35250 354 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 CDH15P55291 814 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 SLC7A9P82251 487 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 ARHGEF7Q14155 803 aa18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 ASTLQ6HA08 431 aaPredicted RBP18.33■□□□□ 0.53
TSPAN4-210ENST00000464987 GLYATQ6IB77 296 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms