RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 IFNL1Q8IU54 200 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 LYSMD2Q8IV50 215 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 MMAAQ8IVH4 418 aaKnown RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 MICU2Q8IYU8 434 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 HS3ST5Q8IZT8 346 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SLC7A5P1Q8MH63 180 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 FAM162AQ96A26 154 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 ACOX2Q99424 681 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 ALOXE3Q9BYJ1 711 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 MMP27Q9H306 513 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SCN3BQ9NY72 215 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 UXTQ9UBK9 157 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 MED16Q9Y2X0 877 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 EP400Q96L91 3159 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 LTBP3Q9NS15 1303 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 NPEPPSL1A6NEC2 478 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 CDC7O00311 574 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 E2F3O00716 465 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 RGS10O43665 173 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 ASNA1O43681 348 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 DYRK3O43781 588 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 XPNPEP2O43895 674 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 DFNA5O60443 496 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 RFPL2O75678 378 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 RECQL5O94762 991 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 OR4F21O95013 312 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 EPOP01588 193 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 G6PDP11413 515 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 IGFBP5P24593 272 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 AGTR2P50052 363 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 MLLT6P55198 1093 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 FCGRTP55899 365 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 MAXP61244 160 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 NCS1P62166 190 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SLC10A7Q0GE19 358 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 LAPTM5Q13571 262 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 RAPSNQ13702 412 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 PON2Q15165 354 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 PLEKHG6Q3KR16 790 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 DALRD3Q5D0E6 543 aaKnown RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 CATSPEREQ5SY80 951 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 FAM171BQ6P995 826 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 AFTPHQ6ULP2 937 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SCIMPQ6UWF3 145 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 AGMOQ6ZNB7 445 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 ZNF467Q7Z7K2 595 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 TMEM179BQ7Z7N9 219 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 C14orf80Q86SX3 495 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 PLD3Q8IV08 490 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 PLPP6Q8IY26 295 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 ZNF683Q8IZ20 524 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 CHPFQ8IZ52 775 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 DNAJB8Q8NHS0 232 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 CNIH3Q8TBE1 160 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 BRSK1Q8TDC3 778 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 FRS2Q8WU20 508 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 TMEM40Q8WWA1 233 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 IPCEF1Q8WWN9 437 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 SLC13A3Q8WWT9 602 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 HMCESQ96FZ2 354 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 ZNF486Q96H40 463 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 ZBTB18Q99592 522 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 TMEM106CQ9BVX2 250 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SIAEQ9HAT2 523 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 SP110Q9HB58 689 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 PARVBQ9HBI1 364 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 PCDH12Q9NPG4 1184 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 PRDM5Q9NQX1 630 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 DCAF13Q9NV06 445 aaKnown RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 TMEM248Q9NWD8 314 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.18□□□□□ -1.26
USP48-206ENST00000464577 MPP6Q9NZW5 540 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 VAPAQ9P0L0 249 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 VPS51Q9UID3 782 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 KCNH4Q9UQ05 1017 aa7.18□□□□□ -1.26
USP48-206ENST00000464577 OR2A25A4D2G3 310 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 MOXD2PA6NHM9 499 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 METTL15A6NJ78 407 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 H0Y626 953 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 J3KR12 359 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 SNPHO15079 494 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 LSM1O15116 133 aaKnown RBP7.17□□□□□ -1.26
USP48-206ENST00000464577 TRIM16O95361 564 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 MT-ND2P03891 347 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 SMIM10L2AP0DMW4 78 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 SMIM10L2BP0DMW5 78 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 IGFBP6P24592 240 aaPredicted RBP7.17□□□□□ -1.26
USP48-206ENST00000464577 PSMA3P25788 255 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 PSMB9P28065 219 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 ALDH4A1P30038 563 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 AKT1P31749 480 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 TGFBR2P37173 567 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 CASP3P42574 277 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 MAGEA2P43356 314 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 MAP2K4P45985 399 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 SCNN1GP51170 649 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 DGKQP52824 942 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 ERVPABLB-1P60509 514 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 IFITM2Q01629 132 aa7.17□□□□□ -1.26
USP48-206ENST00000464577 KRR1Q13601 381 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms