RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 THUMPD3Q9BV44 507 aaKnown RBP3.9□□□□□ -1.79
ITGB1-208ENST00000464001 APOL6Q9BWW8 343 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 DNAI2Q9GZS0 605 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 SMARCAD1Q9H4L7 1026 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 TFB2MQ9H5Q4 396 aaKnown RBP3.9□□□□□ -1.79
ITGB1-208ENST00000464001 TAB2Q9NYJ8 693 aa3.9□□□□□ -1.79
ITGB1-208ENST00000464001 RABL2AQ9UBK7 228 aaPredicted RBP3.9□□□□□ -1.79
ITGB1-208ENST00000464001 TSPAN4O14817 238 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 PRKNO60260 465 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 ZNF23P17027 643 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 NR1D1P20393 614 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 MAPK3P27361 379 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 CHRNB4P30926 498 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 GP5P40197 560 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 SLC12A3P55017 1021 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 CSE1LP55060 971 aaKnown RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 TAS2R38P59533 333 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 RPL24P83731 157 aaKnown RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 GRIK2Q13002 908 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 TNIP1Q15025 636 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 TAF7Q15545 349 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 USP41Q3LFD5 358 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 TCP11X2Q5H9J9 407 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 PLEKHS1Q5SXH7 462 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 C6orf141Q5SZD1 244 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 MPP7Q5T2T1 576 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 HIST2H2BDQ6DRA6 164 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 C11orf88Q6PI97 169 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 QSOX2Q6ZRP7 698 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 GPR180Q86V85 440 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 TBC1D21Q8IYX1 336 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 STPG4Q8N801 248 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 OR6J1Q8NGC5 347 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 OR52I2Q8NH67 350 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 GRK7Q8WTQ7 553 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 DEPDC1BQ8WUY9 529 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 ZNF653Q96CK0 615 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 PABPC5Q96DU9 382 aaKnown RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 PPP1R13BQ96KQ4 1090 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 AK8Q96MA6 479 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 GCNAQ96QF7 691 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 NR1H4Q96RI1 486 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 SLX1AQ9BQ83 275 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 TEX13BQ9BXU2 312 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 VEZTQ9HBM0 779 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 MPP6Q9NZW5 540 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 MRPL15Q9P015 296 aaKnown RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 AKAP7Q9P0M2 348 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 ZNF624Q9P2J8 865 aaPredicted RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 ANAPC5Q9UJX4 755 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 AAR2Q9Y312 384 aaKnown RBP3.89□□□□□ -1.79
ITGB1-208ENST00000464001 IKBKGQ9Y6K9 419 aa3.89□□□□□ -1.79
ITGB1-208ENST00000464001 ZCWPW2A0A1B0GU75 182 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 A0A1B0GVY2 172 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 A4D1N5 150 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 KRT87PA6NCN2 255 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 NDC80O14777 642 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 TXNL1O43396 289 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 TNFSF14O43557 240 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 EXTL3O43909 919 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 SEC22BO75396 215 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 PSMD10O75832 226 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 C22orf31O95567 290 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 SELLP14151 372 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 CDAP32320 146 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 TCF7P36402 384 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-208ENST00000464001 PPARGP37231 505 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-208ENST00000464001 HMGN5P82970 282 aaKnown RBP3.88□□□□□ -1.79
ITGB1-208ENST00000464001 YWHAHQ04917 246 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-208ENST00000464001 CAMK2DQ13557 499 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 LASP1Q14847 261 aaKnown RBP3.88□□□□□ -1.79
ITGB1-208ENST00000464001 MYLK3Q32MK0 819 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 GLIPR1L2Q4G1C9 344 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 RAB41Q5JT25 222 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 DCST1Q5T197 706 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 SUSD1Q6UWL2 747 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 PLEKHM3Q6ZWE6 761 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 CACNA2D4Q7Z3S7 1137 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 METTL23Q86XA0 190 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 BEST3Q8N1M1 668 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 POGLUT1Q8NBL1 392 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 ZBTB44Q8NCP5 570 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 OR5R1Q8NH85 324 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 GSDMBQ8TAX9 411 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 HCAR2Q8TDS4 363 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 ZNF606Q8WXB4 792 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 SLC22A18Q96BI1 424 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 RHBDF1Q96CC6 855 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 RMDN1Q96DB5 314 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 GRAMD2BQ96HH9 432 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 FER1L6-AS2Q96M78 137 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 GBP5Q96PP8 586 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 PIP5K1AQ99755 562 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 CITED2Q99967 270 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-208ENST00000464001 MAK16Q9BXY0 300 aaKnown RBP3.88□□□□□ -1.79
ITGB1-208ENST00000464001 FUT8Q9BYC5 575 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 GLIS2Q9BZE0 524 aaPredicted RBP3.88□□□□□ -1.79
ITGB1-208ENST00000464001 FAM129AQ9BZQ8 928 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 TNMDQ9H2S6 317 aa3.88□□□□□ -1.79
ITGB1-208ENST00000464001 THAP9Q9H5L6 903 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms