RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
COMMD3-205ENST00000463688 SRMSQ9H3Y6 488 aa13.13□□□□□ -0.31
COMMD3-205ENST00000463688 TFB2MQ9H5Q4 396 aaKnown RBP13.13□□□□□ -0.31
COMMD3-205ENST00000463688 GPN2Q9H9Y4 310 aaPredicted RBP13.13□□□□□ -0.31
COMMD3-205ENST00000463688 CASS4Q9NQ75 786 aa13.13□□□□□ -0.31
COMMD3-205ENST00000463688 FOXJ2Q9P0K8 574 aa13.13□□□□□ -0.31
COMMD3-205ENST00000463688 SLC24A2Q9UI40 661 aa13.13□□□□□ -0.31
COMMD3-205ENST00000463688 RARRES3Q9UL19 164 aa13.13□□□□□ -0.31
COMMD3-205ENST00000463688 ITPR1Q14643 2758 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 CES2O00748 559 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 STK17BO94768 372 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 APOA4P06727 396 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 POLBP06746 335 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 CD63P08962 238 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 FGF5P12034 268 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 BASP1P80723 227 aaKnown RBP13.12□□□□□ -0.31
COMMD3-205ENST00000463688 SNX1Q13596 522 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 DNAJC21Q5F1R6 531 aaKnown RBP13.12□□□□□ -0.31
COMMD3-205ENST00000463688 MRNIPQ6NTE8 343 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 C6orf15Q6UXA7 325 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-205ENST00000463688 ASZ1Q8WWH4 475 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 TFGQ92734 400 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-205ENST00000463688 NKD1Q969G9 470 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 SLC22A18Q96BI1 424 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 STAMBPL1Q96FJ0 436 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 MED8Q96G25 268 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 SLC45A3Q96JT2 553 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 FERD3LQ96RJ6 166 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 TCF12Q99081 682 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 C17orf62Q9BQA9 187 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 ULBP3Q9BZM4 244 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 COG4Q9H9E3 785 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 MRM3Q9HC36 420 aaKnown RBP13.12□□□□□ -0.31
COMMD3-205ENST00000463688 C1GALT1Q9NS00 363 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 OCIAD1Q9NX40 245 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 SAMD15Q9P1V8 674 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 PILRAQ9UKJ1 303 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 PADI1Q9ULC6 663 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 TTC7AQ9ULT0 858 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-205ENST00000463688 PSMD13Q9UNM6 376 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 WDR37Q9Y2I8 494 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 TCAF1Q9Y4C2 921 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 KCTD3Q9Y597 815 aa13.12□□□□□ -0.31
COMMD3-205ENST00000463688 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TCRBV7S2A1N4TA0A589 114 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 CCDC78A2IDD5 438 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 C2orf74A8MZ97 194 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 HBQ1P09105 142 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 MSL3P1P0C860 447 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TPSB2P20231 275 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 SHMT2P34897 504 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TUBB4BP68371 445 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 ACVR1Q04771 509 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TUBB2AQ13885 445 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 PTPRCAPQ14761 206 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TPSAB1Q15661 275 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TBC1D21Q8IYX1 336 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 MAGEC3Q8TD91 643 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 DENND1AQ8TEH3 1009 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 ELMO1Q92556 727 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 HDAC10Q969S8 669 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 SLC41A2Q96JW4 573 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 OR6C1Q96RD1 312 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 INSM2Q96T92 566 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TUBB2BQ9BVA1 445 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TLR10Q9BXR5 811 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 GRPEL1Q9HAV7 217 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 OR6C2Q9NZP2 312 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 TMEM9Q9P0T7 183 aa13.11□□□□□ -0.31
COMMD3-205ENST00000463688 ZFHX4Q86UP3 3567 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 C21orf140B9A014 251 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 PGRMC1O00264 195 aaKnown RBP13.1□□□□□ -0.31
COMMD3-205ENST00000463688 PRMT5O14744 637 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-205ENST00000463688 NDC80O14777 642 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 NDUFS3O75489 264 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 KLK3P07288 261 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-205ENST00000463688 MLNP12872 115 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 RPL22P35268 128 aaKnown RBP13.1□□□□□ -0.31
COMMD3-205ENST00000463688 NAA25Q14CX7 972 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 DBN1Q16643 649 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 LRRC8BQ6P9F7 803 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 FAM83HQ6ZRV2 1179 aaPredicted RBP13.1□□□□□ -0.31
COMMD3-205ENST00000463688 FAM92BQ6ZTR7 304 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 AMIGO1Q86WK6 493 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 MAGOHBQ96A72 148 aaKnown RBP13.1□□□□□ -0.31
COMMD3-205ENST00000463688 FOPNLQ96NB1 174 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 CARD6Q9BX69 1037 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 GPR87Q9BY21 358 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 XAB2Q9HCS7 855 aaKnown RBP13.1□□□□□ -0.31
COMMD3-205ENST00000463688 LATS2Q9NRM7 1088 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 CATSPERZQ9NTU4 200 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 SIDT1Q9NXL6 827 aaKnown RBP13.1□□□□□ -0.31
COMMD3-205ENST00000463688 OGFRQ9NZT2 677 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 GNPTGQ9UJJ9 305 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 TUBD1Q9UJT1 453 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 SERTAD3Q9UJW9 196 aa13.1□□□□□ -0.31
COMMD3-205ENST00000463688 ASF1AQ9Y294 204 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms