RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PIGKQ92643 395 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 DLG3Q92796 817 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 KIAA1191Q96A73 305 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 SKA1Q96BD8 255 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 PTERQ96BW5 349 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 TFB2MQ9H5Q4 396 aaKnown RBP14.05□□□□□ -0.16
COL6A1-202ENST00000463060 NMRAL1Q9HBL8 299 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 CAPN10Q9HC96 672 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 WASH6PQ9NQA3 447 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 PCOLCE2Q9UKZ9 415 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 ACSL5Q9ULC5 683 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 SMG5Q9UPR3 1016 aaKnown RBP14.05□□□□□ -0.16
COL6A1-202ENST00000463060 R4GN57 208 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 CACNA1HO95180 2353 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 ATXN2Q99700 1313 aaKnown RBP14.05□□□□□ -0.16
COL6A1-202ENST00000463060 PI4KAP42356 2102 aa14.05□□□□□ -0.16
COL6A1-202ENST00000463060 CCDC189A1A4V9 331 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 A6NCN8 305 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 CDC7O00311 574 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 PLIN3O60664 434 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 EPN2O95208 641 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 JUNDP17535 347 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 PBLDP30039 288 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-202ENST00000463060 RPA3P35244 121 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-202ENST00000463060 RXRGP48443 463 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 BLKP51451 505 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 DUOXA1Q1HG43 343 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 KIF19Q2TAC6 998 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 TECRLQ5HYJ1 363 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 LRRC8EQ6NSJ5 796 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 C16orf46Q6P387 395 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 SLC23A3Q6PIS1 610 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 LVRNQ6Q4G3 990 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 ABRAXAS1Q6UWZ7 409 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 PRR23BQ6ZRT6 265 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 FSTL5Q8N475 847 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-202ENST00000463060 RHEBL1Q8TAI7 183 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 CEP76Q8TAP6 659 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 TMEM159Q96B96 161 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 ATOH8Q96SQ7 321 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 PRRX2Q99811 253 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 ZDHHC5Q9C0B5 715 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 SLC17A7Q9P2U7 560 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 KCNK6Q9Y257 313 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 SNX11Q9Y5W9 270 aa14.04□□□□□ -0.16
COL6A1-202ENST00000463060 TMEM120BA0PK00 339 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 H3BM21 787 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 SCAMP1O15126 338 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 DHRS4L1P0CG22 281 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 VCLP18206 1134 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 TFEBP19484 476 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 AK4P27144 223 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-202ENST00000463060 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-202ENST00000463060 C21orf59P57076 290 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 WDR4P57081 412 aaKnown RBP14.03□□□□□ -0.16
COL6A1-202ENST00000463060 PPP2R2AP63151 447 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 SHBQ15464 509 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 OR4D1Q15615 310 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 TSNQ15631 228 aaKnown RBP14.03□□□□□ -0.16
COL6A1-202ENST00000463060 PPP1R3AQ16821 1122 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 ZNF423Q2M1K9 1284 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 N4BP2L1Q5TBK1 243 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-202ENST00000463060 SBSNQ6UWP8 590 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 RABEPKQ7Z6M1 372 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 SUMF1Q8NBK3 374 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 MRPL57Q9BQC6 102 aaKnown RBP14.03□□□□□ -0.16
COL6A1-202ENST00000463060 LRRC61Q9BV99 259 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 UNKQ9C0B0 810 aaKnown RBP14.03□□□□□ -0.16
COL6A1-202ENST00000463060 DNAJC28Q9NX36 388 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 FAM8A1Q9UBU6 413 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 TBC1D29Q9UFV1 150 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 ADAMTS6Q9UKP5 1117 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 DNAJC16Q9Y2G8 782 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 WDR37Q9Y2I8 494 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 PCDHGA5Q9Y5G8 931 aa14.03□□□□□ -0.16
COL6A1-202ENST00000463060 ZFC3H1O60293 1989 aaKnown RBP14.03□□□□□ -0.16
COL6A1-202ENST00000463060 TP53BP1Q12888 1972 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-202ENST00000463060 G3V2L1 256 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 TM9SF1O15321 606 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 SLC16A5O15375 505 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 PSIP1O75475 530 aaKnown RBP14.02□□□□□ -0.17
COL6A1-202ENST00000463060 EML2O95834 649 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 CELA2BP08218 269 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-202ENST00000463060 RBP1P09455 135 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 MTHFD2P13995 350 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 IDSP22304 550 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 GLRBP48167 497 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 HNRNPKP61978 463 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL6A1-202ENST00000463060 ABRQ12979 859 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 UAP1L1Q3KQV9 507 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 CCDC153Q494R4 210 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 SYTL3Q4VX76 610 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 PLA2G2CQ5R387 149 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 PRAMEF14Q5SWL7 426 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 ZC3H14Q6PJT7 736 aaKnown RBP14.02□□□□□ -0.17
COL6A1-202ENST00000463060 KANSL1Q7Z3B3 1105 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 PDZD3Q86UT5 571 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 MYO1HQ8N1T3 1032 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 SDR16C5Q8N3Y7 309 aa14.02□□□□□ -0.17
COL6A1-202ENST00000463060 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms