RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 KXD1Q9BQD3 176 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 OSBPL10Q9BXB5 764 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TLR10Q9BXR5 811 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CAPS2Q9BXY5 557 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 DUSP16Q9BY84 665 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ULBP1Q9BZM6 244 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TRIM5Q9C035 493 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM192AQ9GZU8 254 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 RAB6CQ9H0N0 254 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 SERHL2Q9H4I8 314 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 PLEKHA4Q9H4M7 779 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 WDR26Q9H7D7 661 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 SYNPO2LQ9H987 977 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TMEM165Q9HC07 324 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TRPC7Q9HCX4 862 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 WDR6Q9NNW5 1121 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 GKN1Q9NS71 199 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TBCCD1Q9NVR7 557 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 IFT80Q9P2H3 777 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 WDR35Q9P2L0 1181 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 DKK2Q9UBU2 259 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNHIT2Q9UHR6 403 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 NOCTQ9UK39 431 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ACAD8Q9UKU7 415 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 TFR2Q9UP52 801 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CNTN6Q9UQ52 1028 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 ASB3Q9Y575 518 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 BZW2Q9Y6E2 419 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 CLUHO75153 1309 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 PATJQ8NI35 1801 aa4.85□□□□□ -1.63
ATPAF1-203ENST00000460928 EP300Q09472 2414 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 KIF26AQ9ULI4 1882 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 A0A0U1RQJ8 604 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 AQP7P3A6NL99 342 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 YJEFN3A6XGL0 299 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 B9A039 149 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 E5RJQ4 531 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 E7ENQ6 273 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 GOLGA8SH3BPF8 625 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 FCHO1O14526 889 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 DCLK1O15075 740 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 PAPSS1O43252 624 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 MSI1O43347 362 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SMIM24O75264 130 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM155BO75949 473 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 USP1O94782 785 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ERBB2P04626 1255 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 HMBSP08397 361 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 PAEPP09466 180 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 HNRNPA1P09651 372 aaKnown RBP eCLIP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 IRF1P10914 325 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 PTPN2P17706 415 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CNTFP26441 200 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 MGAT1P26572 445 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ANXA13P27216 316 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 KRT9P35527 623 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CASP2P42575 452 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 GPD2P43304 727 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 MAGEA11P43364 429 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 TUFMP49411 452 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SERPINB8P50452 374 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 TKTL1P51854 596 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CHN2P52757 468 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 RPL10AP62906 217 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 PIGFQ07326 219 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 PPIDQ08752 370 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 XRCC4Q13426 336 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SPCS2Q15005 226 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ASIC2Q16515 512 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 BCL2A1Q16548 175 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF750Q32MQ0 723 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CFAP221Q4G0U5 840 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 PTPN20Q4JDL3 420 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CFAP157Q5JU67 520 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 BEND6Q5SZJ8 279 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 FAXCQ5TGI0 409 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 NAA35Q5VZE5 725 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CES5AQ6NT32 575 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 MRNIPQ6NTE8 343 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 RETSATQ6NUM9 610 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CYB5D1Q6P9G0 228 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 WDR59Q6PJI9 974 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 LCLAT1Q6UWP7 414 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 C4orf50Q6ZRC1 276 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 DENND5BQ6ZUT9 1274 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CACNA2D4Q7Z3S7 1137 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ZNF571Q7Z3V5 609 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 LSMEM2Q8N112 164 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ARL14EPQ8N8R7 260 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ANKRD52Q8NB46 1076 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 OR1N1Q8NGS0 311 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SPPL2BQ8TCT7 592 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 NTN5Q8WTR8 489 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 SLC35F5Q8WV83 523 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 ATRIPQ8WXE1 791 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 CTNNBL1Q8WYA6 563 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 FGF14Q92915 247 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 FBXO32Q969P5 355 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 PSMG2Q969U7 264 aa4.84□□□□□ -1.63
ATPAF1-203ENST00000460928 P2RY11Q96G91 374 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms