RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 TCF25Q9BQ70 676 aa14.55□□□□□ -0.08
PTPRU-205ENST00000460170 MCMBPQ9BTE3 642 aa14.55□□□□□ -0.08
PTPRU-205ENST00000460170 SLC27A6Q9Y2P4 619 aa14.55□□□□□ -0.08
PTPRU-205ENST00000460170 ANKRD66B4E2M5 251 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 CDC7O00311 574 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 DCLK1O15075 740 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 OR6B1O95007 311 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 CCNYL3P0C7X3 344 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 BMP7P18075 431 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 TAB1Q15750 504 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 TMEM63BQ5T3F8 832 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 ZNF697Q5TEC3 545 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 DNAJB7Q7Z6W7 309 aaPredicted RBP14.54□□□□□ -0.08
PTPRU-205ENST00000460170 C2orf73Q8N5S3 287 aaPredicted RBP14.54□□□□□ -0.08
PTPRU-205ENST00000460170 PIK3C3Q8NEB9 887 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 OR9I1Q8NGQ6 314 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 TEX47Q8TBZ9 253 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 ADAMTS10Q9H324 1103 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 ZIM2Q9NZV7 527 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 SEC14L3Q9UDX4 400 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 ARPC2O15144 300 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 HTR1BP28222 390 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 STC1P52823 247 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 RHDQ02161 417 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 NEK10Q6ZWH5 1172 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 FAM20CQ8IXL6 584 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 COLGALT2Q8IYK4 626 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 HM13Q8TCT9 377 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 PIH1D2Q8WWB5 315 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 C3orf14Q9HBI5 128 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 GULP1Q9UBP9 304 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 ZNF780BQ9Y6R6 833 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 INHAP05111 366 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 C4BPBP20851 252 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 CCR4P51679 360 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 PNLIPRP1P54315 467 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 DPY19L1Q2PZI1 675 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 PLA2G4EQ3MJ16 856 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 RAB6CQ53S08 254 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 LYSMD3Q7Z3D4 306 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 GALNT15Q8N3T1 639 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 RAB6CQ9H0N0 254 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 ABCB8Q9NUT2 735 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 NDOR1Q9UHB4 597 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 GOLGA4Q13439 2230 aaKnown RBP14.54□□□□□ -0.08
PTPRU-205ENST00000460170 ADAMDEC1O15204 470 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 ZW10O43264 779 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 SERPINA1P01009 418 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 GNAZP19086 355 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 GUCA1AP43080 201 aaPredicted RBP14.54□□□□□ -0.08
PTPRU-205ENST00000460170 DNAJB13P59910 316 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 MZT2AQ6P582 158 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 RBM23Q86U06 439 aaKnown RBP14.54□□□□□ -0.08
PTPRU-205ENST00000460170 XAGE5Q8WWM1 108 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 PKP2Q99959 881 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 WRAP53Q9BUR4 548 aaKnown RBP14.54□□□□□ -0.08
PTPRU-205ENST00000460170 CCDC106Q9BWC9 280 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 CCDC177Q9NQR7 707 aaPredicted RBP14.54□□□□□ -0.08
PTPRU-205ENST00000460170 SSR3Q9UNL2 185 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 MAP4K5Q9Y4K4 846 aa14.54□□□□□ -0.08
PTPRU-205ENST00000460170 LCHNA4D1U4 455 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 CACNB4O00305 520 aaPredicted RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 BCAS2O75934 225 aaPredicted RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 HMGCS1Q01581 520 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 SEMG2Q02383 582 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 GPR17Q13304 367 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 KCTD8Q6ZWB6 473 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 PACRGLQ8N7B6 248 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 PHPT1Q9NRX4 125 aaPredicted RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 SEMA3GQ9NS98 782 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 RAPGEFL1Q9UHV5 662 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 OAZ3Q9UMX2 235 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 YIPF1Q9Y548 306 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 TRPM3Q9HCF6 1732 aaPredicted RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 UGT2B17O75795 530 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 EPOP01588 193 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 C8AP07357 584 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 ALPIP09923 528 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 CSNK2BP67870 215 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 LAPTM5Q13571 262 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 UBAP2Q5T6F2 1119 aaKnown RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 C9orf64Q5T6V5 341 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 C14orf80Q86SX3 495 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 TMEM135Q86UB9 458 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 REM2Q8IYK8 340 aaPredicted RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 TXNDC5Q8NBS9 432 aaKnown RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 KIAA1191Q96A73 305 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 MYOCQ99972 504 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 hCG_2039718K7EN88 272 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 FAM189A1O60320 539 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 IFNW1P05000 195 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 FESP07332 822 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 CDH3P22223 829 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 GSCP56915 257 aaPredicted RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 TMEM220Q6QAJ8 160 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 KIAA1324Q6UXG2 1013 aaKnown RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 SLC34A3Q8N130 599 aa14.53□□□□□ -0.08
PTPRU-205ENST00000460170 VANGL1Q8TAA9 524 aaPredicted RBP14.53□□□□□ -0.08
PTPRU-205ENST00000460170 SLC7A6OSQ96CW6 309 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms