RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 MAPK9P45984 424 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 AGTR2P50052 363 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 ZNF547Q8IVP9 402 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 SLC22A15Q8IZD6 547 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 FLCNQ8NFG4 579 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 OR2T34Q8NGX1 318 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 UBTD2Q8WUN7 234 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 LGR4Q9BXB1 951 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 TRIM54Q9BYV2 358 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 PARVBQ9HBI1 364 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 SGK2Q9HBY8 427 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 PTBP2Q9UKA9 531 aaKnown RBP23.93■■□□□ 1.42
U2AF1-204ENST00000459639 APOBEC2Q9Y235 224 aaKnown RBP23.93■■□□□ 1.42
U2AF1-204ENST00000459639 TMEM98Q9Y2Y6 226 aa23.93■■□□□ 1.42
U2AF1-204ENST00000459639 KANSL1LA0AUZ9 987 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 LRRC72A6NJI9 287 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 MATN4O95460 622 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 IGLV3-19P01714 112 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 MYCLP1P12525 358 aaPredicted RBP23.92■■□□□ 1.42
U2AF1-204ENST00000459639 CCR3P51677 355 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 CDH13P55290 713 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 PLOD1Q02809 727 aaPredicted RBP23.92■■□□□ 1.42
U2AF1-204ENST00000459639 CLCQ05315 142 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 LCP2Q13094 533 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 EPGNQ6UW88 154 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 DENND6BQ8NEG7 585 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 HM13Q8TCT9 377 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 EGFL8Q99944 293 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 EBF4Q9BQW3 602 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 GULP1Q9UBP9 304 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 FAM8A1Q9UBU6 413 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 PDE10AQ9Y233 779 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 ZFC3H1O60293 1989 aaKnown RBP23.92■■□□□ 1.42
U2AF1-204ENST00000459639 PRUNE2Q8WUY3 3088 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 UBFD1O14562 309 aaKnown RBP23.92■■□□□ 1.42
U2AF1-204ENST00000459639 GRID2O43424 1007 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 GUCA1CO95843 209 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 CYP2A7P20853 494 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 SERPINB3P29508 390 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 MAT2AP31153 395 aaKnown RBP23.92■■□□□ 1.42
U2AF1-204ENST00000459639 ACSL1P33121 698 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 IDH3AP50213 366 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 UBXN2BQ14CS0 331 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 METTL2BQ6P1Q9 378 aaKnown RBP23.92■■□□□ 1.42
U2AF1-204ENST00000459639 DOK6Q6PKX4 331 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 OR2L2Q8NH16 312 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 RHBDF1Q96CC6 855 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 NSUN5Q96P11 429 aaKnown RBP23.92■■□□□ 1.42
U2AF1-204ENST00000459639 NELL2Q99435 816 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 EIF2B4Q9UI10 523 aaKnown RBP23.92■■□□□ 1.42
U2AF1-204ENST00000459639 OR1A2Q9Y585 309 aa23.92■■□□□ 1.42
U2AF1-204ENST00000459639 PABPN1LA6NDY0 278 aaKnown RBP23.91■■□□□ 1.42
U2AF1-204ENST00000459639 C19orf67A6NJJ6 358 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 E2F3O00716 465 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 POP7O75817 140 aaKnown RBP23.91■■□□□ 1.42
U2AF1-204ENST00000459639 MLYCDO95822 493 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 ANXA5P08758 320 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 PREPP48147 710 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 RPIAP49247 311 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 FZD5Q13467 585 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 CRTC3Q6UUV7 619 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 C11orf96Q7Z7L8 435 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 MTDHQ86UE4 582 aaKnown RBP23.91■■□□□ 1.42
U2AF1-204ENST00000459639 LRRTM4Q86VH4 590 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 FOXJ1Q92949 421 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 ERP27Q96DN0 273 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 RILPQ96NA2 401 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 MYLK2Q9H1R3 596 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 EBF1Q9UH73 591 aa23.91■■□□□ 1.42
U2AF1-204ENST00000459639 DNMT3AQ9Y6K1 912 aaPredicted RBP23.91■■□□□ 1.42
U2AF1-204ENST00000459639 MGAT4DA6NG13 374 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 PSIP1O75475 530 aaKnown RBP23.9■■□□□ 1.42
U2AF1-204ENST00000459639 HIST1H2AGP0C0S8 130 aaPredicted RBP23.9■■□□□ 1.42
U2AF1-204ENST00000459639 TSPAN8P19075 237 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 HIST1H2ADP20671 130 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 AP1S2P56377 157 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 ARHGAP8P85298 464 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 TUBB3Q13509 450 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 FBXO48Q5FWF7 155 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 SPDYAQ5MJ70 313 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 PGBD3Q8N328 593 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 TCAIMQ8N3R3 496 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 LILRA3Q8N6C8 439 aaPredicted RBP23.9■■□□□ 1.42
U2AF1-204ENST00000459639 MAPK15Q8TD08 544 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 TRPC4APQ8TEL6 797 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 HIST1H2AHQ96KK5 128 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 HIST1H2AJQ99878 128 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 H2AFJQ9BTM1 129 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 WWOXQ9NZC7 414 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 ZFP69BQ9UJL9 534 aa23.9■■□□□ 1.42
U2AF1-204ENST00000459639 H3BM21 787 aa23.89■■□□□ 1.42
U2AF1-204ENST00000459639 HGSO14964 777 aaPredicted RBP23.89■■□□□ 1.42
U2AF1-204ENST00000459639 TAPBPO15533 448 aa23.89■■□□□ 1.42
U2AF1-204ENST00000459639 DIAPH2O60879 1101 aa23.89■■□□□ 1.42
U2AF1-204ENST00000459639 OXR1Q8N573 874 aa23.89■■□□□ 1.42
U2AF1-204ENST00000459639 OR56A4Q8NGH8 313 aa23.89■■□□□ 1.42
U2AF1-204ENST00000459639 MCOLN3Q8TDD5 553 aa23.89■■□□□ 1.42
U2AF1-204ENST00000459639 AGAP11Q8TF27 550 aa23.89■■□□□ 1.42
U2AF1-204ENST00000459639 TMEM79Q9BSE2 394 aa23.89■■□□□ 1.42
U2AF1-204ENST00000459639 TNFRSF12AQ9NP84 129 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms