RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 KATNA1O75449 491 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 FGF18O76093 207 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 GUCA1CO95843 209 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 CLTBP09497 229 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 EBLN1P0CF75 366 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 CHRM1P11229 460 aaPredicted RBP14.8□□□□□ -0.04
LDLR-202ENST00000455727 G6PDP11413 515 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 BMP1P13497 986 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 MAD2L1Q13257 205 aaPredicted RBP14.8□□□□□ -0.04
LDLR-202ENST00000455727 PHKG1Q16816 387 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 TRIM46Q7Z4K8 759 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 ELMOD1Q8N336 334 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 CENPNQ96H22 339 aaPredicted RBP14.8□□□□□ -0.04
LDLR-202ENST00000455727 RPL10LQ96L21 214 aaKnown RBP14.8□□□□□ -0.04
LDLR-202ENST00000455727 ZNF641Q96N77 438 aaPredicted RBP14.8□□□□□ -0.04
LDLR-202ENST00000455727 EGFL8Q99944 293 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 SLC46A2Q9BY10 475 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 CEP44Q9C0F1 390 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 WWOXQ9NZC7 414 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 SLAMF8Q9P0V8 285 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 TRPS1Q9UHF7 1281 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 ANGPTL3Q9Y5C1 460 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 SLC4A7Q9Y6M7 1214 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 A0A1W2PQ67 120 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 A0A1W2PRU2 124 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 PIK3CGP48736 1102 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 PTSQ03393 145 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 APOFQ13790 326 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 ADRM1Q16186 407 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 RFTN2Q52LD8 501 aaPredicted RBP14.8□□□□□ -0.04
LDLR-202ENST00000455727 NHSL2Q5HYW2 709 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 C22orf39Q6P5X5 142 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 DLEU7Q6UYE1 221 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 CMTM8Q8IZV2 173 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 ASIC4Q96FT7 647 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 YME1L1Q96TA2 773 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 TSR3Q9UJK0 312 aaKnown RBP14.8□□□□□ -0.04
LDLR-202ENST00000455727 RNF11Q9Y3C5 154 aa14.8□□□□□ -0.04
LDLR-202ENST00000455727 IGLV3-16A0A075B6K0 115 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 GRM6O15303 877 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 ARHGEF15O94989 841 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 POP4O95707 220 aaKnown RBP14.79□□□□□ -0.04
LDLR-202ENST00000455727 C8AP07357 584 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 C7P10643 843 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 CKMT2P17540 419 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 HLA-FP30511 346 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 GSTT1P30711 240 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 CTSOP43234 321 aaPredicted RBP14.79□□□□□ -0.04
LDLR-202ENST00000455727 STK19P49842 368 aaPredicted RBP14.79□□□□□ -0.04
LDLR-202ENST00000455727 LRRC66Q68CR7 880 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 SATL1Q86VE3 508 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 NAT14Q8WUY8 206 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 ULK4Q96C45 1275 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 COPS8Q99627 209 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 APOL5Q9BWW9 433 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 ANKRD60Q9BZ19 345 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 INTS7Q9NVH2 962 aaKnown RBP14.79□□□□□ -0.04
LDLR-202ENST00000455727 DUS2Q9NX74 493 aaKnown RBP14.79□□□□□ -0.04
LDLR-202ENST00000455727 ZMYM5Q9UJ78 669 aa14.79□□□□□ -0.04
LDLR-202ENST00000455727 A8MX80 341 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 SOCS2O14508 198 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 PGM3O95394 542 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 EPB42P16452 691 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 CCT8P50990 548 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 POLE2P56282 527 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 KIAA0040Q15053 153 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 CYP51A1Q16850 503 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 FUT11Q495W5 492 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 IYDQ6PHW0 289 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 SLC2A7Q6PXP3 512 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 TBC1D21Q8IYX1 336 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 DGCR14Q96DF8 476 aaKnown RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 PRPF18Q99633 342 aaKnown RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 C9orf16Q9BUW7 83 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 ASIC5Q9NY37 505 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 EIF3LQ9Y262 564 aaKnown RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 PCDHB3Q9Y5E6 796 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 AK5Q9Y6K8 562 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 MTCL1Q9Y4B5 1905 aaKnown RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 MYOFQ9NZM1 2061 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 NRG2O14511 850 aaPredicted RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 INPP4BO15327 924 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 ULK1O75385 1050 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 ADH1AP07327 375 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 VARSP26640 1264 aaKnown RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 OXTRP30559 389 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 GGT5P36269 586 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 CASP2P42575 452 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 ROR2Q01974 943 aaKnown RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 PWP1Q13610 501 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 CARD16Q5EG05 197 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 IFNEQ86WN2 208 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 ADGRG2Q8IZP9 1017 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 GLB1L3Q8NCI6 653 aaPredicted RBP14.78□□□□□ -0.04
LDLR-202ENST00000455727 KREMEN2Q8NCW0 462 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 FAM110BQ8TC76 370 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 TFAP2CQ92754 450 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 TMEM74Q96NL1 305 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 SLC29A3Q9BZD2 475 aa14.78□□□□□ -0.04
LDLR-202ENST00000455727 TRIM8Q9BZR9 551 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms