RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 H2AFB1P0C5Y9 115 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 H2AFB2P0C5Z0 115 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 PRKAR1AP10644 381 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 IFNGR1P15260 489 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF28P17035 718 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 TYRP1P17643 537 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 RPL10P27635 214 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 CA5AP35218 305 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 NOP2P46087 812 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 FASLGP48023 281 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 SEPHS1P49903 392 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 DRG2P55039 364 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 GFERP55789 205 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 DYNLT1P63172 113 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 TPM4P67936 248 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 MC2RQ01718 297 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 TRA2AQ13595 282 aaKnown RBP eCLIP4.62□□□□□ -1.676e-7■■■■□ 25.8
GTF3C3-208ENST00000455546 PTPRCAPQ14761 206 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 NOMO1Q15155 1222 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 SEPT7Q16181 437 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 SKIDA1Q1XH10 827 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ASTE1Q2TB18 679 aaPredicted RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 KHDC1Q4VXA5 237 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 DCAF12Q5T6F0 453 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 HENMT1Q5T8I9 393 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ATP1A1-AS1Q5TC04 95 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 C22orf34Q6ZV56 151 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 H2AFVQ71UI9 128 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ARHGAP22Q7Z5H3 698 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ADGRG6Q86SQ4 1221 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 NT5DC3Q86UY8 548 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ZDHHC13Q8IUH4 622 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 MAP7D3Q8IWC1 876 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 SLC25A41Q8N5S1 370 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 PLD5Q8N7P1 536 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 BMPERQ8N8U9 685 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 OR8K1Q8NGG5 319 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 OR10G6Q8NH81 332 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 SPATA22Q8NHS9 363 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 CCHCR1Q8TD31 782 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 NAT14Q8WUY8 206 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 UBE2FQ969M7 185 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 FAF2Q96CS3 445 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 RTP4Q96DX8 246 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ELMO2Q96JJ3 720 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 COX4I2Q96KJ9 171 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 PLEKHG4BQ96PX9 1271 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 TRIB3Q96RU7 358 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF670Q9BS34 389 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 MAK16Q9BXY0 300 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 GPR63Q9BZJ6 419 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 SPRY4Q9C004 299 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 OSGEPL1Q9H4B0 414 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 CLMPQ9H6B4 373 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 TRIM39Q9HCM9 518 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF71Q9NQZ8 489 aaPredicted RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 STARD5Q9NSY2 213 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 SPTLC3Q9NUV7 552 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 PKD2L2Q9NZM6 624 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 OGFRQ9NZT2 677 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF624Q9P2J8 865 aaPredicted RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 RCOR3Q9P2K3 495 aaPredicted RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 CPNE7Q9UBL6 633 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ZC3H7BQ9UGR2 993 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 IL17BQ9UHF5 180 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 PILRAQ9UKJ1 303 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 TMPRSS11EQ9UL52 423 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 DNAJC16Q9Y2G8 782 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 SPO11Q9Y5K1 396 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 HEMK1Q9Y5R4 338 aaPredicted RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 MRPS18BQ9Y676 258 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 CACNA1DQ01668 2161 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 ITPR1Q14643 2758 aa4.62□□□□□ -1.67
GTF3C3-208ENST00000455546 TRBV23-1A0A0A0MS06 115 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 A6NCN8 305 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 OR52A4PA6NMU1 304 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 B4E171 279 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 K7EM74 188 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 APOL1O14791 398 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 POLR1CO15160 346 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SUV39H1O43463 412 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 BUD23O43709 281 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 KIF1CO43896 1103 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 AKR1B10O60218 316 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UGT1A9O60656 530 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 STK17BO94768 372 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 CDK14O94921 469 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 VIPP01282 170 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 PYGLP06737 847 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 SNRPB2P08579 225 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 F3P13726 295 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 ZNF7P17097 686 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 BPIP17213 487 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 AMD1P17707 334 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 XRCC1P18887 633 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UGT1A6P19224 532 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UGT1A1P22309 533 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 UGT1A4P22310 534 aa4.61□□□□□ -1.67
GTF3C3-208ENST00000455546 F8A1P23610 371 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms