RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 NANOGQ9H9S0 305 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SLC22A14Q9Y267 594 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 TNPO3Q9Y5L0 923 aaKnown RBP11.77□□□□□ -0.53
SMPD4-213ENST00000454468 MAGED1Q9Y5V3 778 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-213ENST00000454468 ZSWIM8A7E2V4 1837 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 ATG2BQ96BY7 2078 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 H3BSA7 217 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 NOBOXO60393 691 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 IGLV3-27P01718 113 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SERPIND1P05546 499 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 GNAO1P09471 354 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 COL6A1P12109 1028 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 MSH3P20585 1137 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 CTNNB1P35222 781 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 ERVK-8P63133 956 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 ZXDBP98169 803 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 RFTN1Q14699 578 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-213ENST00000454468 AASDHQ4L235 1098 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SERPINA13PQ6UXR4 307 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SLC44A2Q8IWA5 706 aaPredicted RBP11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SYTL1Q8IYJ3 562 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 PELI3Q8N2H9 469 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SFRP1Q8N474 314 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 GPR26Q8NDV2 337 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 RHEBL1Q8TAI7 183 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 TRIB3Q96RU7 358 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 EXD2Q9NVH0 621 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SH3BP4Q9P0V3 963 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 LHX3Q9UBR4 397 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 MYRFQ9Y2G1 1151 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 SCN4AP35499 1836 aa11.77□□□□□ -0.53
SMPD4-213ENST00000454468 GNG14A0A1W2PPG7 69 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 C7orf72A4D263 438 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 LEFTY2O00292 366 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 ACOT8O14734 319 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 DFNA5O60443 496 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 NOL3O60936 208 aaKnown RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 GBAP04062 536 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 OR56A5P0C7T3 313 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 MYCLP1P12525 358 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 SLC7A1P30825 629 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 CA5AP35218 305 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 HMGCLP35914 325 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 IRF8Q02556 426 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 MPPE1Q53F39 396 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 ANKRD26P1Q6NSI1 321 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 SNX20Q7Z614 316 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 GANCQ8TET4 914 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 CHID1Q9BWS9 393 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 MRGBPQ9NV56 204 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 SUCOQ9UBS9 1254 aaKnown RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 RIMS3Q9UJD0 308 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 A0A1W2PP18 115 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 CFAP99D6REC4 459 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 H3BNC9 293 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 PLOD2O00469 737 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 TBC1D4O60343 1298 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 KRT6AP02538 564 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 KRT6BP04259 564 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 RPL5P46777 297 aaKnown RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 KRT6CP48668 564 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 AP1S1P61966 158 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 TIAL1Q01085 375 aaKnown RBP eCLIP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 TMED1Q13445 227 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 SPIDRQ14159 915 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 TEAD2Q15562 447 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 TRAPPC5Q8IUR0 188 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 SNRNP27Q8WVK2 155 aaKnown RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 EID2BQ96D98 161 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 MAELQ96JY0 434 aaKnown RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 ZFYVE19Q96K21 471 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 TRAPPC9Q96Q05 1148 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 SUV39H2Q9H5I1 410 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 LRTM1Q9HBL6 345 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 B4GALT6Q9UBX8 382 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 FAF1Q9UNN5 650 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 DHRS7Q9Y394 339 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 COQ9O75208 318 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 TRBC1P01850 177 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 CYP4B1P13584 511 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 PRKACGP22612 351 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 S100A3P33764 101 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 SLC26A3P40879 764 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 WASP42768 502 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 PREPP48147 710 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 PPM1FP49593 454 aaPredicted RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 ST8SIA6P61647 398 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 LY6G5CQ5SRR4 150 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 KANK2Q63ZY3 851 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 LPCAT2Q7L5N7 544 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 TRMT11Q7Z4G4 463 aaKnown RBP11.76□□□□□ -0.53
SMPD4-213ENST00000454468 DHRSXQ8N5I4 330 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 HAUS8Q9BT25 410 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 BRD9Q9H8M2 597 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 PHF24Q9UPV7 400 aa11.76□□□□□ -0.53
SMPD4-213ENST00000454468 FAM92AA1XBS5 289 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 SAP18O00422 153 aaKnown RBP11.75□□□□□ -0.53
SMPD4-213ENST00000454468 PITPNM1O00562 1244 aa11.75□□□□□ -0.53
SMPD4-213ENST00000454468 SLC22A2O15244 555 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms