RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DBPQ10586 325 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 GRB10Q13322 594 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PMS2P3Q13401 168 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MFSD10Q14728 455 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MED22Q15528 200 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CRY1Q16526 586 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF699Q32M78 642 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FUT11Q495W5 492 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF667Q5HYK9 610 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CLLU1Q5K131 121 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TRAPPC3LQ5T215 181 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 HIST2H3PS2Q5TEC6 136 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MEDAGQ5VYS4 303 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FOXB2Q5VYV0 432 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 FAM205BPQ63HN1 556 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LCN8Q6JVE9 175 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 MRNIPQ6NTE8 343 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TMEM270Q6UE05 265 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LRRC55Q6ZSA7 311 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 USP45Q70EL2 814 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PTAR1Q7Z6K3 402 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 RNF130Q86XS8 419 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PHF13Q86YI8 300 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 SULF1Q8IWU6 871 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 CMTR2Q8IYT2 770 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 OFCC1Q8IZS5 231 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TOMM5Q8N4H5 51 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LRRC71Q8N4P6 559 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TAB3Q8N5C8 712 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 GLB1L3Q8NCI6 653 aaPredicted RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 OR4D10Q8NGI6 311 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OR2T11Q8NH01 316 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ST7LQ8TDW4 575 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ATG4AQ8WYN0 398 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TAAR8Q969N4 342 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 PMEPA1Q969W9 287 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GIMAP5Q96F15 307 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 RANBP9Q96S59 729 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 EBNA1BP2Q99848 306 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 MRI1Q9BV20 369 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GPR63Q9BZJ6 419 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 DPY30Q9C005 99 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 SLC25A32Q9H2D1 315 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZBTB3Q9H5J0 574 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ATP13A3Q9H7F0 1226 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ACTR8Q9H981 624 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 LRRC4CQ9HCJ2 640 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ZBTB26Q9HCK0 441 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 TREM1Q9NP99 234 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 OSGEPQ9NPF4 335 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 C11orf16Q9NQ32 467 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 XPNPEP1Q9NQW7 623 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NRBP2Q9NSY0 501 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 GPRC5BQ9NZH0 403 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 NUFIP1Q9UHK0 495 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 ZNF112Q9UJU3 913 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 ANGPT4Q9Y264 503 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 INVSQ9Y283 1065 aa2.18□□□□□ -2.06
USP53-202ENST00000450251 AFDNP55196 1824 aaKnown RBP2.18□□□□□ -2.06
USP53-202ENST00000450251 PIGBOS1A0A0B4J2F0 54 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LOC100130705A0A1B0GUX0 176 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CARNS1A5YM72 827 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 FAM155AB1AL88 458 aaPredicted RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ZNF487B1APH4 448 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PER2O15055 1255 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 BUD23O43709 281 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 SCO2O43819 266 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RAD1O60671 282 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ULK1O75385 1050 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CNTN5O94779 1100 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 RAB3DO95716 219 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 CSN2P05814 226 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ANXA8P13928 327 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ITGB6P18564 788 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MMP8P22894 467 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 AXLP30530 894 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DNAJA1P31689 397 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 RPL9P32969 192 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 ETFBP38117 255 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 GCLMP48507 274 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SLC12A3P55017 1021 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LSM3P62310 102 aaKnown RBP2.17□□□□□ -2.06
USP53-202ENST00000450251 HERVK_113P63132 956 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 VLDLRP98155 873 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TEKQ02763 1124 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 MPP2Q14168 576 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TMEM132BQ14DG7 1078 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 PEA15Q15121 130 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 LLGL1Q15334 1064 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SF3B4Q15427 424 aaKnown RBP eCLIP2.17□□□□□ -2.06
USP53-202ENST00000450251 GPR19Q15760 415 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SNAPC1Q16533 368 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 IGSF11Q5DX21 431 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 TOR2AQ5JU69 321 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 UBE2UQ5VVX9 321 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 ARHGAP11AQ6P4F7 1023 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 C3P1Q6ZMU1 363 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 BBS12Q6ZW61 710 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 DPH6Q7L8W6 267 aa2.17□□□□□ -2.06
USP53-202ENST00000450251 SLC26A9Q7LBE3 791 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms