RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 KANK2Q63ZY3 851 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 CLEC6AQ6EIG7 209 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 KIAA1161Q6NSJ0 714 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 RASGRP3Q8IV61 690 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 OR14C36Q8NHC7 312 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 UBTD2Q8WUN7 234 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 ESAMQ96AP7 390 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 SIPA1Q96FS4 1042 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 LENG8Q96PV6 779 aaPredicted RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 C1QTNF2Q9BXJ5 285 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 SLC6A17Q9H1V8 727 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 LNPEPQ9UIQ6 1025 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 ZFR2Q9UPR6 939 aaKnown RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 PDE10AQ9Y233 779 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 FIS1Q9Y3D6 152 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 TRIOO75962 3097 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 SKAP2O75563 359 aaPredicted RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 ANXA5P08758 320 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 HIST1H2AGP0C0S8 130 aaPredicted RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 HIST1H2ADP20671 130 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 CALB2P22676 271 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 ADPRHP54922 357 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 LEXMQ3ZCV2 418 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 TMEM259Q4ZIN3 620 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 USP30Q70CQ3 517 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 KBTBD6Q86V97 674 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 HEATR4Q86WZ0 1026 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 TREML1Q86YW5 311 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 TRAPPC5Q8IUR0 188 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 ACTRT2Q8TDY3 377 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 PPM1EQ8WY54 764 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 KLHL29Q96CT2 875 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 HIST1H2AHQ96KK5 128 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 LINC00615Q96LM1 132 aaPredicted RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 ZNF382Q96SR6 550 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 HIST1H2AJQ99878 128 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 H2AFJQ9BTM1 129 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 CD244Q9BZW8 370 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 ARL15Q9NXU5 204 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 DNAJC15Q9Y5T4 150 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 C17orf113A0A1B0GUU1 675 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 PRR5-ARHGAP8B1AHC4 643 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 MYO1CO00159 1063 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 GIPC1O14908 333 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 LIN7AO14910 233 aaPredicted RBP13.96□□□□□ -0.17
USP39-207ENST00000450066 PCCBP05166 539 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 ZNF8P17098 575 aaPredicted RBP13.96□□□□□ -0.17
USP39-207ENST00000450066 CYP2A7P20853 494 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 MAPK9P45984 424 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 PKNOX1P55347 436 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 AP1S2P56377 157 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 ARHGAP8P85298 464 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 CDK3Q00526 305 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 SFSWAPQ12872 951 aaKnown RBP13.96□□□□□ -0.17
USP39-207ENST00000450066 SGCGQ13326 291 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 RBBP7Q16576 425 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 C18orf21Q32NC0 220 aaPredicted RBP13.96□□□□□ -0.17
USP39-207ENST00000450066 MAP7D1Q3KQU3 841 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 TTC23LQ6PF05 361 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 ZNF547Q8IVP9 402 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 SLC22A15Q8IZD6 547 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 TCAIMQ8N3R3 496 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 CEP70Q8NHQ1 597 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 MRGPRX1Q96LB2 322 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 TMEM79Q9BSE2 394 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 TEX101Q9BY14 249 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 LRMDAQ9H2I8 198 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 PREBQ9HCU5 417 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 WWOXQ9NZC7 414 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 GULP1Q9UBP9 304 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 MMP17Q9ULZ9 603 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 NCKAP1Q9Y2A7 1128 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 STK38LQ9Y2H1 464 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 TRPM6Q9BX84 2022 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 ANKRD12Q6UB98 2062 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 MYO10Q9HD67 2058 aa13.96□□□□□ -0.17
USP39-207ENST00000450066 A0A1B0GTL3 188 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 A0A1W2PQU0 124 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 PABPN1LA6NDY0 278 aaKnown RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 CFAP73A6NFT4 308 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 PAK4O96013 591 aaPredicted RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 ESRRAP11474 423 aaPredicted RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 FOSL2P15408 326 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 GGT5P36269 586 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 TRIM23P36406 574 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 PREPP48147 710 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 HSPA7P48741 367 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 HNMTP50135 292 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 FOXA1P55317 472 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 GTF2H2Q13888 395 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 FGL2Q14314 439 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 NXNQ6DKJ4 435 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 PTCRAQ6ISU1 281 aaPredicted RBP13.95□□□□□ -0.18
USP39-207ENST00000450066 GTF2H2CQ6P1K8 395 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 NEK5Q6P3R8 708 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 GPRIN3Q6ZVF9 776 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 GOLGA7Q7Z5G4 137 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 SYVN1Q86TM6 617 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 MCOLN3Q8TDD5 553 aa13.95□□□□□ -0.18
USP39-207ENST00000450066 SLC7A6OSQ96CW6 309 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms