RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 FAM87AP0C7U9 286 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 ZNF28P17035 718 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 STAT5AP42229 794 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 MC1RQ01726 317 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 GSTM4Q03013 218 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 TUBB3Q13509 450 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 DBN1Q16643 649 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 BORAQ6PGQ7 559 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 MICALCLQ6ZW33 695 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 ACVR1CQ8NER5 493 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 OR4E2Q8NGC2 313 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 RNF31Q96EP0 1072 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 SLC41A2Q96JW4 573 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 CATSPER2Q96P56 530 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 TTC1Q99614 292 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 SEMA5BQ9P283 1151 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 PAK5Q9P286 719 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 LNPEPQ9UIQ6 1025 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 RPS6KL1Q9Y6S9 549 aa14.89□□□□□ -0.03
CHD3-205ENST00000449744 MROH6A6NGR9 719 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 SPAG6O75602 509 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 SUN1O94901 812 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 MT-ND3P03897 115 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 CCNYL3P0C7X3 344 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 ETS1P14921 441 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 ADRA1DP25100 572 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 NSG1P42857 185 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 HSD11B2P80365 405 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 NFATC3Q12968 1075 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 RPA4Q13156 261 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 ITIH4Q14624 930 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 CCNG2Q16589 344 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.88□□□□□ -0.03
CHD3-205ENST00000449744 TMTC4Q5T4D3 741 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 LYPLAL1Q5VWZ2 237 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 BPHLQ86WA6 291 aaPredicted RBP14.88□□□□□ -0.03
CHD3-205ENST00000449744 PIANPQ8IYJ0 282 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 CLDN19Q8N6F1 224 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 GALNT6Q8NCL4 622 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 MAIP1Q8WWC4 291 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 LCN9Q8WX39 176 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 STARD8Q92502 1023 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 FAM117AQ9C073 453 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 SRMSQ9H3Y6 488 aa14.88□□□□□ -0.03
CHD3-205ENST00000449744 HEMK1Q9Y5R4 338 aaPredicted RBP14.88□□□□□ -0.03
CHD3-205ENST00000449744 MGAQ8IWI9 3026 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 CCDC162PA2VCL2 907 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 OR51F1A6NGY5 319 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 F8W8V4 182 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 MATN2O00339 956 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 NKX2-8O15522 239 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 FTH1P02794 183 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 APRTP07741 180 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 EBLN1P0CF75 366 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 PRKAR1AP10644 381 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 FOLR1P15328 257 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 POLR2CP19387 275 aaPredicted RBP14.87□□□□□ -0.03
CHD3-205ENST00000449744 TCN2P20062 427 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 PSMA3P25788 255 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 PDHA2P29803 388 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 FOXN2P32314 431 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 DLSTP36957 453 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 CCR10P46092 362 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 ARCN1P48444 511 aaKnown RBP14.87□□□□□ -0.03
CHD3-205ENST00000449744 CD151P48509 253 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 CDC20Q12834 499 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 SEMA5AQ13591 1074 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 KCNAB1Q14722 419 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 C16orf46Q6P387 395 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 AFTPHQ6ULP2 937 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 ZNF662Q6ZS27 426 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 NLRP9Q7RTR0 991 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 GSTA5Q7RTV2 222 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 PRUNE1Q86TP1 453 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 LRRC8AQ8IWT6 810 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 CARFQ8N187 725 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 TRIM58Q8NG06 486 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 TFGQ92734 400 aaPredicted RBP14.87□□□□□ -0.03
CHD3-205ENST00000449744 HDAC10Q969S8 669 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 FCRL4Q96PJ5 515 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 RANBP9Q96S59 729 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 OR52A5Q9H2C5 316 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 MVB12BQ9H7P6 319 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 FGF21Q9NSA1 209 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 SOHLH2Q9NX45 425 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 IL17BQ9UHF5 180 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 PCDHB3Q9Y5E6 796 aa14.87□□□□□ -0.03
CHD3-205ENST00000449744 ZNF462Q96JM2 2506 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 GSAPA4D1B5 854 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 GOLGA6L3A6NEY3 463 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 LIN7AO14910 233 aaPredicted RBP14.86□□□□□ -0.03
CHD3-205ENST00000449744 ZBTB11O95625 1053 aaPredicted RBP14.86□□□□□ -0.03
CHD3-205ENST00000449744 GOT2P00505 430 aaKnown RBP14.86□□□□□ -0.03
CHD3-205ENST00000449744 OR56A5P0C7T3 313 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 CDH3P22223 829 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 PPARGP37231 505 aaPredicted RBP14.86□□□□□ -0.03
CHD3-205ENST00000449744 GRIA1P42261 906 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 PREPP48147 710 aa14.86□□□□□ -0.03
CHD3-205ENST00000449744 KPNA2P52292 529 aaKnown RBP14.86□□□□□ -0.03
CHD3-205ENST00000449744 PRAMEP78395 509 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms