RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 ADAMTS10Q9H324 1103 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 VPS28Q9UK41 221 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 M0R129 80 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 OR1I1O60431 355 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CYP11A1P05108 521 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 GRK4P32298 578 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 HTR6P50406 440 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF177Q13360 481 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 KRR1Q13601 381 aaKnown RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 RAPSNQ13702 412 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 FAM187BQ17R55 369 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CYBRD1Q53TN4 286 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 C6orf136Q5SQH8 315 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CES5AQ6NT32 575 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CILP2Q8IUL8 1156 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 STARD8Q92502 1023 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 KLRG1Q96E93 195 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 Q96MT0 163 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 MAF1Q9H063 256 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 PAQR5Q9NXK6 330 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 SLC13A4Q9UKG4 626 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 DCLK1O15075 740 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 AP2A2O94973 939 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 EPN2O95208 641 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 UROSP10746 265 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 PKMP14618 531 aaKnown RBP12.21□□□□□ -0.45
UBE3B-204ENST00000449510 ALDH6A1Q02252 535 aaKnown RBP12.21□□□□□ -0.45
UBE3B-204ENST00000449510 ZSWIM7Q19AV6 140 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 NKAPQ8N5F7 415 aaKnown RBP12.21□□□□□ -0.45
UBE3B-204ENST00000449510 DTX3Q8N9I9 347 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 TEX37Q96LM6 180 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 FCRL5Q96RD9 977 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 SMOQ99835 787 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 RBM38Q9H0Z9 239 aaKnown RBP12.21□□□□□ -0.45
UBE3B-204ENST00000449510 CRISPLD1Q9H336 500 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 INIPQ9NRY2 104 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 AGPAT4Q9NRZ5 378 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 TMEM9Q9P0T7 183 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 GPR39O43194 453 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 ZW10O43264 779 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 AQP9O43315 295 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 GJB3O75712 270 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 GLUD1P00367 558 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 EPB42P16452 691 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 HTR1BP28222 390 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 CHI3L1P36222 383 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-204ENST00000449510 GNPDA1P46926 289 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 ALDH9A1P49189 494 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 RHOAP61586 193 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 SPIBQ01892 262 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 SIRPB2Q5JXA9 342 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 CYS1Q717R9 158 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 SPATA19Q7Z5L4 167 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 UBE2FQ969M7 185 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 ZUFSPQ96AP4 578 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 CDCA5Q96FF9 252 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 ZYG11BQ9C0D3 744 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 TNKS2Q9H2K2 1166 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 MEAF6Q9HAF1 191 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 TXNRD2Q9NNW7 524 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 CTPS2Q9NRF8 586 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 DKK3Q9UBP4 350 aa12.21□□□□□ -0.45
UBE3B-204ENST00000449510 NINQ8N4C6 2090 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 ILVBLA1L0T0 632 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 IFRD1O00458 451 aaPredicted RBP12.21□□□□□ -0.46
UBE3B-204ENST00000449510 UBFD1O14562 309 aaKnown RBP12.21□□□□□ -0.46
UBE3B-204ENST00000449510 TPST2O60704 377 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 RHOCP08134 193 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 HAPLN1P10915 354 aaPredicted RBP12.21□□□□□ -0.46
UBE3B-204ENST00000449510 ACVRL1P37023 503 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 MAGEA3P43357 314 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 SNRPD2P62316 118 aaKnown RBP12.21□□□□□ -0.46
UBE3B-204ENST00000449510 ERVK-8P63133 956 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 AAK1Q2M2I8 961 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 ZNF404Q494X3 552 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 SYCE2Q6PIF2 218 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 GALNT12Q8IXK2 581 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 STK40Q8N2I9 435 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 SNX27Q96L92 541 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 TMEM209Q96SK2 561 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 BARD1Q99728 777 aaKnown RBP12.21□□□□□ -0.46
UBE3B-204ENST00000449510 TDRD1Q9BXT4 1180 aaKnown RBP12.21□□□□□ -0.46
UBE3B-204ENST00000449510 SLC25A51Q9H1U9 297 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 NSUN3Q9H649 340 aaKnown RBP12.21□□□□□ -0.46
UBE3B-204ENST00000449510 ABCC13Q9NSE7 274 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 ACTL7AQ9Y615 435 aa12.21□□□□□ -0.46
UBE3B-204ENST00000449510 SLC1A7O00341 560 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 ITGBL1O95965 494 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 IGFBP6P24592 240 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 GSTM4Q03013 218 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 ENPEPQ07075 957 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 ATP6AP1Q15904 470 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 RAB43Q86YS6 212 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 EPHX4Q8IUS5 362 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 C2CD4AQ8NCU7 369 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 DIRAS2Q96HU8 199 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 PPP1R2P1Q96PQ5 205 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms