RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 TMEM74Q96NL1 305 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 FERD3LQ96RJ6 166 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 INSM2Q96T92 566 aaPredicted RBP13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 P2RY12Q9H244 342 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 SLC40A1Q9NP59 571 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 FBXO6Q9NRD1 293 aaPredicted RBP13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 FBXO5Q9UKT4 447 aa13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 ATXN7L1Q9ULK2 861 aaPredicted RBP13.71□□□□□ -0.21
GTF3C3-206ENST00000448539 BPTFQ12830 3046 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 ESYT3A0FGR9 886 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 LILRA5A6NI73 299 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 E5RI56 91 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 S1PR4O95977 384 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 PKMP14618 531 aaKnown RBP13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 CHRM3P20309 590 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 CD1CP29017 333 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 PDHA2P29803 388 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 CCR7P32248 378 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 SLC1A2P43004 574 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 CD151P48509 253 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 CSE1LP55060 971 aaKnown RBP13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 INHBCP55103 352 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 ADARP55265 1226 aaKnown RBP13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 HSPA14Q0VDF9 509 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 ISXQ2M1V0 245 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 NKAIN2Q5VXU1 208 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 CAPRIN2Q6IMN6 1127 aaKnown RBP13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 NAPRTQ6XQN6 538 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 CCDC25Q86WR0 208 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 DENND6AQ8IWF6 608 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 NOA1Q8NC60 698 aaKnown RBP13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 SPDYE1Q8NFV5 336 aaPredicted RBP13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 FBXO25Q8TCJ0 367 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 NCSTNQ92542 709 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 RMDN2Q96LZ7 410 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 TBC1D10AQ9BXI6 508 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 FOXP3Q9BZS1 431 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 OR52A5Q9H2C5 316 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 RDH14Q9HBH5 336 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 FAM114A2Q9NRY5 505 aa13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 ZFC3H1O60293 1989 aaKnown RBP13.7□□□□□ -0.22
GTF3C3-206ENST00000448539 SLC5A10A0PJK1 596 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 CASC3O15234 703 aaKnown RBP13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 UBXN7O94888 489 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 CARSP49589 748 aaKnown RBP13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 GPR18Q14330 331 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 FASTKD3Q14CZ7 662 aaKnown RBP13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 ZNF658BQ4V348 819 aaPredicted RBP13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 CTSL3PQ5NE16 218 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 PHF19Q5T6S3 580 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 STEAP4Q687X5 459 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 DUS1LQ6P1R4 473 aaKnown RBP13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 KLHL35Q6PF15 583 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 XKR5Q6UX68 686 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 KIAA0408Q6ZU52 694 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 PDZD3Q86UT5 571 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 UNC5BQ8IZJ1 945 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 LKAAEAR1Q8TD35 194 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 ZFPM2Q8WW38 1151 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 TFGQ92734 400 aaPredicted RBP13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 GATA6Q92908 595 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 BIRC8Q96P09 236 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 NUDT22Q9BRQ3 303 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 PHACTR1Q9C0D0 580 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 MVB12BQ9H7P6 319 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 AKAP7Q9P0M2 348 aaPredicted RBP13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 MTRF1LQ9UGC7 380 aaKnown RBP13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 ASF1AQ9Y294 204 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 ENTPD2Q9Y5L3 495 aa13.69□□□□□ -0.22
GTF3C3-206ENST00000448539 ASXL3Q9C0F0 2248 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 RP1P56715 2156 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 PRAMEF33A0A0G2JMD5 474 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 TYRP1P17643 537 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 AOAHP28039 575 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 MPP1Q00013 466 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 MGAT5Q09328 741 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 CBLBQ13191 982 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 SQSTM1Q13501 440 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 FRG1Q14331 258 aaKnown RBP13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 TRADDQ15628 312 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 ZNF789Q5FWF6 425 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 TMEM71Q6P5X7 295 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 CEP128Q6ZU80 1094 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 PLXDC1Q8IUK5 500 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 C2CD4AQ8NCU7 369 aaPredicted RBP13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 ACVR1CQ8NER5 493 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 OR4D9Q8NGE8 314 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 SKA2Q8WVK7 121 aaPredicted RBP13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 SEC14L1Q92503 715 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 ATXN7L3BQ96GX2 97 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 WDR83Q9BRX9 315 aaKnown RBP13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 FAM129AQ9BZQ8 928 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 NRSN2Q9GZP1 204 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 KIR3DX1Q9H7L2 352 aa13.68□□□□□ -0.22
GTF3C3-206ENST00000448539 ZFATQ9P243 1243 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms