RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FAM153BP0C7A2 387 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 DCDC1P59894 354 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 PDIA2Q13087 525 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 FAM153CQ494X1 144 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 UBAP2Q5T6F2 1119 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 CES3Q6UWW8 571 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 CCDC25Q86WR0 208 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 ANKMY2Q8IV38 441 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 TTC30BQ8N4P2 665 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 ESX1Q8N693 406 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 APOBEC4Q8WW27 367 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 CTRCQ99895 268 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 ZSCAN5AQ9BUG6 496 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 SPATA16Q9BXB7 569 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 XAB2Q9HCS7 855 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 ATXN10Q9UBB4 475 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 ANAPC2Q9UJX6 822 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 HECTD1Q9ULT8 2610 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 CHUKO15111 745 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 KMOO15229 486 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 VIPP01282 170 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 C9P02748 559 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 ZNF8P17098 575 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 AMD1P17707 334 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 MAPK9P45984 424 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 ARL4CP56559 192 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 UBE2IP63279 158 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 SARNPP82979 210 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 TMPRSS15P98073 1019 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 TLE1Q04724 770 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 CUL1Q13616 776 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 HIF1AQ16665 826 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 TMEM26Q6ZUK4 368 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 TIPARPQ7Z3E1 657 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 TMC3Q7Z5M5 1100 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 PTRH1Q86Y79 214 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 TRAM1L1Q8N609 369 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 SIGLEC10Q96LC7 697 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 C9orf72Q96LT7 481 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 ZNF778Q96MU6 729 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 PLEKHG4BQ96PX9 1271 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 TBC1D10AQ9BXI6 508 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 OR2AG1Q9H205 316 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 BPIFA1Q9NP55 256 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 SAYSD1Q9NPB0 183 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 PRDM8Q9NQV8 689 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 KLC4Q9NSK0 619 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 NFKBIL1Q9UBC1 381 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 SLC2A6Q9UGQ3 507 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 CHMP2BQ9UQN3 213 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 PCDHB3Q9Y5E6 796 aa13.48□□□□□ -0.25
PDLIM2-213ENST00000448520 MN1Q10571 1320 aaPredicted RBP13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 LDB2O43679 373 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 VEGFDO43915 354 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 DLGAP3O95886 979 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 MLNP12872 115 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 TCN2P20062 427 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 NMBRP28336 390 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 ELK3P41970 407 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 CAV1Q03135 178 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 CDC20Q12834 499 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 IL11RAQ14626 422 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 CASC4Q6P4E1 433 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 ABRAXAS1Q6UWZ7 409 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 GLT6D1Q7Z4J2 308 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 ADGRG6Q86SQ4 1221 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 TRIM48Q8IWZ4 208 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 RBM12BQ8IXT5 1001 aaKnown RBP13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 MYRIPQ8NFW9 859 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 OR13C4Q8NGS5 318 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 C9orf43Q8TAL5 461 aaPredicted RBP13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 GLYATL1Q969I3 302 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 CFAP36Q96G28 342 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 FMO2Q99518 471 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 GPR63Q9BZJ6 419 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 OSGEPL1Q9H4B0 414 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 APMAPQ9HDC9 416 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 CHRAC1Q9NRG0 131 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 BFARQ9NZS9 450 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 KLHL3Q9UH77 587 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 TCAF1Q9Y4C2 921 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 MAD1L1Q9Y6D9 718 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 PTPN13Q12923 2485 aa13.47□□□□□ -0.25
PDLIM2-213ENST00000448520 MAST4O15021 2626 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 SDR42E2A6NKP2 422 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 E7ESA3 106 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 SMAPO00193 183 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 KCNJ13O60928 360 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 UBXN7O94888 489 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 PRKAR1AP10644 381 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 ZNF7P17097 686 aaPredicted RBP13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 TNFRSF8P28908 595 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 CASRP41180 1078 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 SLC19A1P41440 591 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 STAT5AP42229 794 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 NPY2RP49146 381 aa13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 ZNF140P52738 457 aaPredicted RBP13.46□□□□□ -0.25
PDLIM2-213ENST00000448520 FOXM1Q08050 763 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms