RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 OSGEPL1Q9H4B0 414 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 XPR1Q9UBH6 696 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 SUSD2Q9UGT4 822 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 KCNK6Q9Y257 313 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 PLEKHM1Q9Y4G2 1056 aa19.14■□□□□ 0.65
SGCE-207ENST00000447873 A0A1B0GTW7 788 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 NPEPPSL1A6NEC2 478 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 CDC7O00311 574 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 PROCP04070 461 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 MPC1LP0DKB6 136 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 CHN1P15882 459 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 PDHA2P29803 388 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 RPA4Q13156 261 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 TSNQ15631 228 aaKnown RBP19.13■□□□□ 0.65
SGCE-207ENST00000447873 ZNF542PQ5EBM4 170 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 HHATQ5VTY9 493 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 METRNLQ641Q3 311 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 CYHR1Q6ZMK1 362 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 PRR23BQ6ZRT6 265 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 KNL1Q8NG31 2342 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 STAG3L4Q8TBR4 150 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 PTERQ96BW5 349 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 TMEM168Q9H0V1 697 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 TRNAU1APQ9NX07 287 aaKnown RBP19.13■□□□□ 0.65
SGCE-207ENST00000447873 OGFRQ9NZT2 677 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 CPSF2Q9P2I0 782 aaKnown RBP19.13■□□□□ 0.65
SGCE-207ENST00000447873 PILRBQ9UKJ0 227 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 IKZF3Q9UKT9 509 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 ACSL5Q9ULC5 683 aa19.13■□□□□ 0.65
SGCE-207ENST00000447873 TP53BP1Q12888 1972 aaPredicted RBP19.13■□□□□ 0.65
SGCE-207ENST00000447873 TK2O00142 265 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 POLR3GO15318 223 aaPredicted RBP19.12■□□□□ 0.65
SGCE-207ENST00000447873 ETV4P43268 484 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 NXPH1P58417 271 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 TECRLQ5HYJ1 363 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 SPATS2Q86XZ4 545 aaKnown RBP19.12■□□□□ 0.65
SGCE-207ENST00000447873 RHEBL1Q8TAI7 183 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 PIGKQ92643 395 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 TMEM74BQ9NUR3 256 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 DNAJC28Q9NX36 388 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 KLF15Q9UIH9 416 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 TDRD6O60522 2096 aaKnown RBP19.12■□□□□ 0.65
SGCE-207ENST00000447873 ANKRD12Q6UB98 2062 aa19.12■□□□□ 0.65
SGCE-207ENST00000447873 CCDC189A1A4V9 331 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 IDSP22304 550 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 CTBSQ01459 385 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 ABRQ12979 859 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 TCEA2Q15560 299 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 OR4D1Q15615 310 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 XKR5Q6UX68 686 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 ADAMTSL2Q86TH1 951 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 SYT12Q8IV01 421 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 PHACTR4Q8IZ21 702 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 FOPNLQ96NB1 174 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 INTS9Q9NV88 658 aaKnown RBP19.11■□□□□ 0.65
SGCE-207ENST00000447873 MID2Q9UJV3 735 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 RNF112Q9ULX5 631 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 ZNF318Q5VUA4 2279 aa19.11■□□□□ 0.65
SGCE-207ENST00000447873 C8GP07360 202 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 CTSEP14091 401 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 JUNDP17535 347 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 RPL10P27635 214 aaKnown RBP19.1■□□□□ 0.65
SGCE-207ENST00000447873 MAPK9P45984 424 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 WDR4P57081 412 aaKnown RBP19.1■□□□□ 0.65
SGCE-207ENST00000447873 ILF3Q12906 894 aaKnown RBP eCLIP19.1■□□□□ 0.65
SGCE-207ENST00000447873 TMEM151AQ8N4L1 468 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 CFAP61Q8NHU2 1237 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 OR52A5Q9H2C5 316 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 TCEAL2Q9H3H9 227 aaPredicted RBP19.1■□□□□ 0.65
SGCE-207ENST00000447873 APOBEC3BQ9UH17 382 aaKnown RBP19.1■□□□□ 0.65
SGCE-207ENST00000447873 FANCMQ8IYD8 2048 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 A0A1B0GVT2 93 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 KERAO60938 352 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 MATN4O95460 622 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 CSF2P04141 144 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 SLC35G4P0C7Q5 338 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 NME1P15531 152 aaKnown RBP19.1■□□□□ 0.65
SGCE-207ENST00000447873 AK4P27144 223 aaPredicted RBP19.1■□□□□ 0.65
SGCE-207ENST00000447873 KCNC1P48547 511 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 SERPINB4P48594 390 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 CLCNKAP51800 687 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 SBSNQ6UWP8 590 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 FRA10AC1Q70Z53 315 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 TAX1BP1Q86VP1 789 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 CCL4L1Q8NHW4 92 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 RDH11Q8TC12 318 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 DYDC1Q8WWB3 177 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 ASB11Q8WXH4 323 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 EXT2Q93063 718 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 ATOH8Q96SQ7 321 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 COPG2Q9UBF2 871 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 ADAMTS6Q9UKP5 1117 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 PSMD13Q9UNM6 376 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 ST14Q9Y5Y6 855 aa19.1■□□□□ 0.65
SGCE-207ENST00000447873 PI4KAP42356 2102 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 WDR91A4D1P6 747 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 PRR19A6NJB7 356 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 SYCE1LA8MT33 242 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 TARM1B6A8C7 271 aa19.09■□□□□ 0.65
SGCE-207ENST00000447873 IFRD1O00458 451 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms