RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 AGAP11Q8TF27 550 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 ROBO4Q8WZ75 1007 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 ZNF501Q96CX3 271 aaPredicted RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 MAGED4Q96JG8 741 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 C8orf76Q96K31 380 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 SIGLEC10Q96LC7 697 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 Q96MF0 132 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 OR2M4Q96R27 311 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 LMF1Q96S06 567 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 MLPHQ9BV36 600 aaPredicted RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 UCK2Q9BZX2 261 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 RAB33BQ9H082 229 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 ZCCHC4Q9H5U6 513 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 STN1Q9H668 368 aaKnown RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 PHPT1Q9NRX4 125 aaPredicted RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 SIRT5Q9NXA8 310 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TBC1D29Q9UFV1 150 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 SLC12A6Q9UHW9 1150 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TENM1Q9UKZ4 2725 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 DYSFO75923 2080 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TRAV17A0A0B4J275 112 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 KIR2DS5A0A0G2JLQ3 304 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 A0A0G2JNG1 304 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TRIM64A6NGJ6 449 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TRIM64BA6NI03 449 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 KIR2DS3K7RE56 304 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 AGPSO00116 658 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 O00370 1275 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 IKBKBO14920 756 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TEX33O43247 280 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TRIM13O60858 407 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 UBXN7O94888 489 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 SLC2A3P11169 496 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 EGR1P18146 543 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 PIK3CAP42336 1068 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 RPL34P49207 117 aaKnown RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 NASPP49321 788 aaPredicted RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 RGS7P49802 495 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 EPHB1P54762 984 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 DLX5P56178 289 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TUBB4BP68371 445 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 CDK3Q00526 305 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 CACNG1Q06432 222 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TUBB2AQ13885 445 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 KIR2DS5Q14953 304 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 PCBP2Q15366 365 aaKnown RBP eCLIP3.17□□□□□ -1.9
PMS1-215ENST00000447232 PYCR3Q53H96 274 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 ATXN7L2Q5T6C5 722 aaPredicted RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 PRAMEF17Q5VTA0 474 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 PRSS57Q6UWY2 283 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 LIPIQ6XZB0 460 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 CERS6Q6ZMG9 384 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 SKAP1Q86WV1 359 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 DOLPP1Q86YN1 238 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 CHERPQ8IWX8 916 aaKnown RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 ZZZ3Q8IYH5 903 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 LRRC75A-AS1Q8N1F1 130 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 MARVELD2Q8N4S9 558 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TTC39CQ8N584 583 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 SIDT2Q8NBJ9 832 aaKnown RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 OR8K5Q8NH50 307 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 ASB5Q8WWX0 329 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 UBXN4Q92575 508 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 RSC1A1Q92681 617 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 DACT3Q96B18 629 aaPredicted RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 FAXDC2Q96IV6 333 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 TUBB2BQ9BVA1 445 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 PLEKHF2Q9H8W4 249 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 KCND1Q9NSA2 647 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 CISHQ9NSE2 258 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 ERVK13-1Q9NX77 482 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 CPNE7Q9UBL6 633 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 HESX1Q9UBX0 185 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 PADI2Q9Y2J8 665 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 LUC7L2Q9Y383 392 aaKnown RBP3.17□□□□□ -1.9
PMS1-215ENST00000447232 FHOD1Q9Y613 1164 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 WNK1Q9H4A3 2382 aa3.17□□□□□ -1.9
PMS1-215ENST00000447232 IGLV3-10A0A075B6K4 115 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 A6NNC1 897 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 I6L893 689 aaPredicted RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 DNAJC6O75061 913 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 KLHL18O94889 574 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 RASAL1O95294 804 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 F3P13726 295 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 PI3P19957 117 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 TEAD1P28347 426 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 CHRNB4P30926 498 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 CCR1P32246 355 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 RBMXP38159 391 aaKnown RBP3.16□□□□□ -1.9
PMS1-215ENST00000447232 CTSCP53634 463 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ABRQ12979 859 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 MTA1Q13330 715 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ZNF789Q5FWF6 425 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 AFMIDQ63HM1 303 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 HEPHL1Q6MZM0 1159 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 ISLR2Q6UXK2 745 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 FAM92BQ6ZTR7 304 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 TMEM26Q6ZUK4 368 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 STXBP4Q6ZWJ1 553 aa3.16□□□□□ -1.9
PMS1-215ENST00000447232 KMT5CQ86Y97 462 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms